Job Description P76082 Confidence 39.21% Date Thu Jan 5 12:18:25 GMT 2012 Rank 132 Aligned Residues 79 % Identity 15% Template c3maxB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:histone deacetylase 2; PDBTitle: crystal structure of human hdac2 complexed with an n-(2-aminophenyl)2 benzamide Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	N	R	P	A	A	R	N	A	L	N	N	A	L	L	M	Q	L	V	N	E	L	E	A	A	A	T	D	T	S	I	S	V	C	V	I	T	G	N	A	R	F	F	A	A	G	A	D	L	N	E	M	A	E	K	D	L	A	A	T	L	N	D	T	R	P	Q	L	W	A	R	L	Q	A	F	N	K	P	L
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.
Template Sequence		A	V	N	F	P	M	R	D	G	I	D	D	E	S	Y	G	Q	I	F	K	P	I	I	S	K	V	M	E	M	Y	Q	P	S	A	V	V	L	.	.	.	.	.	.	.	Q	C	G	A	D	S	L	S	G	D	R	L	G	C	F	N	L	T	V	K	G	H	A	K	C	V	E	V	V	K	T	F	N	L	P	L
Template Known Secondary structure									T	T		B																						S					.	.	.	.	.	.	.				G	G	G	B	T	T		S	S				B	B														T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		96	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	V	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	L	G	G	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions