Job Description P76082 Confidence 99.31% Date Thu Jan 5 12:18:25 GMT 2012 Rank 80 Aligned Residues 147 % Identity 16% Template c3kthD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form Resolution 3.00 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	L	N	R	P	A	A	R	N	A	L	N	N	A	L	L	M	Q	L	V	N	E	L	E	A	A	A	T	D	T	S	I	S	V	C	V	I	T	G	N	A	R	F	F	A	A	G	A	D	L	N	E	M	A	E	K	D	L	A	A	T	L	N	D	T	R	P	Q	L	W	A	R	L	Q	A	F	N	K
Query Conservation
Alig confidence									.	.	.	.	.																												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.																												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	M	L	G	S	A	.	.	.	.	.	I	D	D	N	V	A	N	S	I	V	S	Q	L	L	F	L	A	A	E	D	P	E	K	E	I	S	L	.	.	.	.	Y	I	N	S	P	G	G	S	I	T	A	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	Y	D	T	M	Q	F	I	K	P
Template Known Secondary structure							S		.	.	.	.	.	B																				S	S	S					.	.	.	.							B							.	.	.	.	.	.	.	.	.	.	.	.	.									S	S	S
Template Predicted Secondary structure									.	.	.	.	.																												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.														.	.	.	.	.	80	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																		.	.	.	150	.	.	.	.
Predicted Secondary structure																								.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	I	A	A	V	N	G	Y	A	L	G	A	G	C	E	L	A	L	L	C	D	.	.	V	V	V	A	G	E	N	A	R	F	G	L	P	E	I	T	L	G	I	M	P	G	A	G	G	T	Q	R	L	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	G	K	S	L	A	S
Query Conservation																								.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	S	T	I	C	I	G	M	A	A	S	M	G	A	F	L	L	A	A	G	E	K	G	K	R	Y	A	L	P	N	S	E	V	M	I	H	Q	P	L	G	G	A	Q	G	Q	A	T	E	I	E	I	A	A	K	R	I	L	L	L	R	D	K	L	N	K	V	L	A	E	R	T	G	Q	P	L	E	V	I	E
Template Known Secondary structure													T									S		T	T						T	T														S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	V	L	S	G	E	S	I	T	A	Q	Q	A	Q	Q	A	G	L	V	S	D	V	F	P	S	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	T	D	R	D	N	F	K	S	A	E	E	A	L	E	Y	G	L	I	D	K	I	L	T	H	L	E
Template Known Secondary structure				T	S	S													T	S		S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions