Job Description P76082 Confidence 100.00% Date Thu Jan 5 12:18:25 GMT 2012 Rank 67 Aligned Residues 219 % Identity 29% Template c3h02F_ PDB info PDB header:lyase Chain: F: PDB Molecule:naphthoate synthase; PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium. Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																																																.
Query SS confidence											.																																																.
Query Sequence		M	S	E	L	I	V	S	R	Q	.	Q	R	V	L	L	L	T	L	N	R	P	A	A	R	N	A	L	N	N	A	L	L	M	Q	L	V	N	E	L	E	A	A	A	T	D	T	S	I	S	V	C	V	I	T	G	N	A	.	R	F	F	A	A	G	A	D	L	N	E	M	A	E	K	D	L	A	A	T	L	N
Query Conservation											.																																																.
Alig confidence											.																																																.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	D	I	R	Y	E	K	S	T	D	G	I	A	K	I	T	I	N	R	P	Q	V	R	N	A	F	R	P	L	T	V	K	E	X	I	Q	A	L	A	D	A	R	Y	D	D	N	V	G	V	I	I	L	T	G	E	G	D	K	A	F	C	A	G	G	D	H	L	N	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S							T	T	S									G	G	G	T	T		B																			T	T									S	S	S	S						B				T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	R	P	Q	L	W	A	R	L	Q	A	F	N	K	P	L	I	A	A	V	N	G	Y	A	L	G	A	G	C	E	L	A	L	L	C	D	V	V	V	A	G	E	N	A	R	F	G	L	P	E	I	T	L	G	I	M	P	G	A	G	G	T	Q	R	L	I	R	S	V	G	K	S	L	A	S	K	M	V	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	V	L	D	F	Q	R	Q	I	R	T	C	P	K	P	V	V	A	X	V	A	G	Y	S	I	G	G	G	H	V	L	H	X	X	C	D	L	T	I	A	A	E	N	A	I	F	G	Q	T	G	P	K	V	G	S	F	D	G	G	W	G	A	S	Y	X	A	R	I	V	G	Q	K	K	A	R	E	I	W	F
Template Known Secondary structure		.	.												S	S								S				T									S	S						T	T											T					S	T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	E	S	I	T	A	Q	Q	A	Q	Q	A	G	L	V	S	D	V	F	P	S	D	L	T	L	E	Y	A	L	Q	L	A	S	K	M	A	R	H	S	P	L	A	L	Q	A	A	K	Q	A	L	R	Q	S	Q	E	V	A	L	Q	A	G	L	A	Q	E	R	Q	L	F	T	L	L	A	A	T
Query Conservation
Alig confidence																																																									.	.
Template Conservation																																																									.	.
Template Sequence		L	C	R	Q	Y	D	A	Q	Q	A	L	D	X	G	L	V	N	T	V	V	P	L	A	D	L	E	K	E	T	V	R	W	C	R	E	X	L	Q	N	S	P	X	A	L	R	C	L	K	A	A	L	N	A	D	C	.	.	D	G	Q	A	G	L	Q	E	L	A	G	N	A	T	X	L	F	Y	X
Template Known Secondary structure														T	T	S	S	S					G	G	G														T	S															T	T	.	.	S																	T	T
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions