Job Description P76082 Confidence 98.46% Date Thu Jan 5 12:18:25 GMT 2012 Rank 100 Aligned Residues 169 % Identity 13% Template c3glmD_ PDB info PDB header:lyase Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	L	T	L	N	R	P	A	A	R	N	A	L	N	N	A	L	L	M	Q	L	V	N	E	L	E	A	A	A	T	D	T	S	I	S	V	C	V	I	T	G	N	A	R	F	F	A	A	G	A	D	L	N	E	M	A	E	K	D	L	A	A	T	L	N	D	T	R	P	Q	L	W	A	R	L	Q	A	F
Query Conservation
Alig confidence																																												.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		V	Y	I	V	A	S	D	N	K	K	M	A	G	A	W	V	P	G	Q	A	E	N	L	I	R	C	S	D	A	A	K	M	M	H	L	P	L	I	Y	L	L	N	.	.	.	.	.	.	C	S	G	V	E	F	P	N	Q	D	K	V	Y	P	N	R	R	G	G	G	T	P	F	F	R	N	S	E	L	N	Q	L
Template Known Secondary structure									T	T	T	G	G	G		B		T	T																T									.	.	.	.	.	.				B		G	G	G					S	S	S	T	T	S	T	T												T
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		N	K	P	L	I	A	A	V	N	G	Y	A	L	G	A	G	C	E	L	A	L	L	C	D	V	V	V	A	G	E	N	A	R	F	G	L	P	E	I	T	L	G	I	M	P	G	A	G	G	T	Q	R	L	I	R	S	V	G	K	S	L	A	S	K	M	V	L	S	G	E	S	I	T	A	Q	Q	A	Q	.	.
Query Conservation																																																																																.	.
Alig confidence																																				.	.	.	.	.	.	.																				.	.	.	.	.	.													.	.
Template Conservation																																				.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		G	I	P	V	I	V	G	I	Y	G	T	N	P	A	G	G	G	Y	H	S	I	S	P	T	I	L	I	A	H	Q	D	A	N	M	.	.	.	.	.	.	.	A	V	G	G	A	G	A	E	Q	I	I	A	A	Q	I	E	N	S	K	.	.	.	.	.	.	L	K	V	P	A	P	G	S	V	P	I	H	Y	D
Template Known Secondary structure		T									S				T								S	S	S						T	T				.	.	.	.	.	.	.		S	S														T	T	T	.	.	.	.	.	.	T					T	T	B					T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.							.	.	.	.	.	240	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		Q	A	G	L	V	S	D	V	F	P	S	D	L	T	.	L	E	Y	A	L	Q	L	A	S	K	M	A	R	H	S	P
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		E	T	G	F	F	R	E	V	Y	Q	N	D	L	G	V	I	D	G	I	K	K	Y	I	S	Y	L	P	A	Y	N	L
Template Known Secondary structure		T	S			S					S	S															S					G
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions