Job Description P76082 Confidence 28.56% Date Thu Jan 5 12:18:25 GMT 2012 Rank 140 Aligned Residues 79 % Identity 10% Template c3ew8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:histone deacetylase 8; PDBTitle: crystal structure analysis of human hdac8 d101l variant Resolution 1.80 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	N	R	P	A	A	R	N	A	L	N	N	A	L	L	M	Q	L	V	N	E	L	E	A	A	A	T	D	T	S	I	S	V	C	V	I	T	G	N	A	R	F	F	A	A	G	A	D	L	N	E	M	A	E	K	D	L	A	A	T	L	N	D	T	R	P	Q	L	W	A	R	L	Q	A	F	N	K	P	L
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.
Template Sequence		S	V	N	V	P	I	Q	D	G	I	Q	D	E	K	Y	Y	Q	I	C	E	S	V	L	K	E	V	Y	Q	A	F	N	P	K	A	V	V	L	.	.	.	.	.	.	.	Q	L	G	A	D	T	I	A	G	D	P	M	C	S	F	N	M	T	P	V	G	I	G	K	C	L	K	Y	I	L	Q	W	Q	L	A	T
Template Known Secondary structure									T	T																								S					.	.	.	.	.	.	.				S	T	T	B	T	T		T	T					B														T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.								.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		96	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	V	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	L	G	G	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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