Job Description P76082 Confidence 100.00% Date Thu Jan 5 12:18:25 GMT 2012 Rank 46 Aligned Residues 240 % Identity 25% Template c2fbmB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:y chromosome chromodomain protein 1, telomeric isoform b; PDBTitle: acetyltransferase domain of cdy1 Resolution 2.28 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.
Predicted Secondary structure																	.																																																						.	.	.	.	.	.
Query SS confidence																	.																																																						.	.	.	.	.	.
Query Sequence		M	S	E	L	I	V	S	R	Q	Q	R	V	L	L	L	.	T	L	N	R	P	A	A	R	N	A	L	N	N	A	L	L	M	Q	L	V	N	E	L	E	A	A	A	T	D	T	S	I	S	V	C	V	I	T	G	N	A	R	F	F	A	A	G	A	D	L	N	E	M	.	.	.	.	.	.	A	E	K	D	L
Query Conservation																	.																																																						.	.	.	.	.	.
Alig confidence																	.																															.																							.	.	.	.	.	.
Template Conservation																																																.
Template Sequence		Y	R	D	I	V	V	K	K	E	D	G	F	T	Q	I	V	L	S	T	R	S	T	E	K	N	A	L	N	T	E	V	I	K	E	I	V	N	A	L	N	S	A	A	A	D	D	.	S	K	L	V	L	F	S	A	A	G	S	V	F	C	C	G	L	D	F	G	Y	F	V	K	H	L	R	N	N	R	N	T	A
Template Known Secondary structure				S							T	T									S	S	S	S	T	T		B																		S	S	.		S								S	S		S	B			B												S	T	T
Template Predicted Secondary structure																																																.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	T	L	N	D	T	R	P	Q	L	W	A	R	L	Q	A	F	N	K	P	L	I	A	A	V	N	G	Y	A	L	G	A	G	C	E	L	A	L	L	C	D	V	V	V	A	G	E	N	A	R	F	G	L	P	E	I	T	L	G	I	M	P	G	A	G	G	T	Q	R	L	I	R	S	V	G	K	S	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	E	M	V	D	T	I	K	N	F	V	N	T	F	I	Q	F	K	K	P	I	V	V	S	V	N	G	P	A	I	G	L	G	A	S	I	L	P	L	C	D	L	V	W	A	N	E	K	A	W	F	Q	T	P	Y	T	T	F	G	Q	S	P	D	G	C	S	S	I	T	F	P	K	M	M	G	K	A	S	A
Template Known Secondary structure																					S								S				T					T	G	G	G	S	S						T	T											T					T	T
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	M	V	L	S	G	E	S	I	T	A	Q	Q	A	Q	Q	A	G	L	V	S	D	V	F	P	S	D	L	T	L	E	Y	A	L	Q	L	A	S	K	M	A	R	H	S	P	L	A	L	Q	A	A	K	Q	A	L	R	Q	S	Q	E	V	A	L	Q	A	G	L	A	Q	E	R	Q	L	F	T	L	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	M	L	I	A	G	R	K	L	T	A	R	E	A	C	A	K	G	L	V	S	Q	V	F	L	T	G	T	F	T	Q	E	V	M	I	Q	I	K	E	L	A	S	Y	N	P	I	V	L	E	E	C	K	A	L	V	R	C	N	I	K	L	E	L	E	Q	A	N	E	R	E	C	E	V	L	R	K	I	W	S
Template Known Secondary structure						T	T												T	T	S	S	S					G	G	G														T	S														T	T	T
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
		234	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	D	R	H	E	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	Q	G	I	E	S	M
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		522	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions