Return to main results Retrieve Phyre Job Id

Job DescriptionP46889
Confidence91.16%DateWed Jan 25 15:20:57 GMT 2012
Rank79Aligned Residues169
% Identity21%Templated2onka1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution3.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   964.....970.........980..... ....990.........1000.........1010.........1020.........1030..... ..
Predicted Secondary structure 







.

















.....

Query SS confidence 





















.

















































. . . . .

Query Sequence  LTVVLGKDIAGEPVVADLAKMP. HLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGI. . . . . PH
Query Conservation                        .                                                  .....  
Alig confidence 





















.
















..

























.



.....

Template Conservation 
 
   
  
   




        


 








 .. 
 
      
 
   
         .   
  
    
Template Sequence  LKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLE. . LIAGIVKPDRGEVRLNGADITPLPPE. RRGIGFVPQDY
Template Known Secondary structure  TT
SS

TTSS..TSS

STT
TTS
TT.TS

B


SS
Template Predicted Secondary structure 









..


















.



Template SS confidence 















































































   3......10.........20.........30.........40.. .......50.........60........ .70.........
 
   1038.1040.........1050.... .....1060.........1070...... ...1080.........1090.........1100......
Predicted Secondary structure 







..




.........


















Query SS confidence 
















. .





















. . . . . . . . .





























Query Sequence  LLTEVVTDMKDAANALR. . WCVNEMERRYKLMSALGVRNLA. . . . . . . . . GYNEKIAEADRMMRPIPDPYWKPGDSMDAQ
Query Conservation                   ..                      .........                              
Alig confidence 
















..





















.........














...............
Template Conservation        

   
                   
    
          

 
    
 

 

   ...............
Template Sequence  ALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQ. . . . . . . . . . . . . . .
Template Known Secondary structure 


TTS
TT
TTS
TTT
TTTTT

GGGS
TT
...............
Template Predicted Secondary structure 




































...............
Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140....
 
   1107..1110.........1120.........1130.........1140.........1150.........1160
Predicted Secondary structure 
















Query SS confidence 





















































Query Sequence  HPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPS
Query Conservation                                                        
Alig confidence  .......































...











Template Conservation  .......
 
 




   

          
  
    ...  


 


   
Template Sequence  . . . . . . . PRLLLLDEPLSAVDLKTKGVLMEELRFVQREF. . . DVPILHVTHDLI
Template Known Secondary structure  .......
SSBSTTSS

...T

S
Template Predicted Secondary structure  .......














...



Template SS confidence 





















































   145....150.........160.........170...... ...180........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions