Return to main results Retrieve Phyre Job Id

Job DescriptionP46889
Confidence95.20%DateWed Jan 25 15:20:57 GMT 2012
Rank33Aligned Residues129
% Identity19%Templated1tf7a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   987..990.........1000.........1010.........1020.........1030.........1040.........1050.........1060......
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKL
Query Conservation                                                                                  
Alig confidence 






















.....................



































Template Conservation    
 
  




 
   
     .....................      

    
     
                 
Template Sequence  TLVSGTSGTGKTLFSIQFLYNGI. . . . . . . . . . . . . . . . . . . . . IEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDE
Template Known Secondary structure  STTSS.....................


SSS
GGGT

T
Template Predicted Secondary structure 




.....................











Template SS confidence 















































































   42.......50.........60.... .....70.........80.........90.........100
 
   1067. .1070.........1080.........1090.........1100.........1110.........1120....... ..1130...
Predicted Secondary structure  ...........


































..
Query SS confidence 

. . . . . . . . . . .


























































. .





Query Sequence  MS. . . . . . . . . . . ALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLM. . MTVGKK
Query Conservation    ...........                                                           ..      
Alig confidence 

...........




















.....................
















..





Template Conservation                                    .....................      
 


              
Template Sequence  GKLFILDASPDPEGQEVVGGFDLSALIERINYAI. . . . . . . . . . . . . . . . . . . . . QKYRARRVSIDSVTSVFQQYDASSV
Template Known Secondary structure  TS



SS

S

SS.....................T
S
STTTSTTT

Template Predicted Secondary structure 













.....................









Template SS confidence 















































































   101........110.........120.........130.... .....140.........150.........
 
   1134.....1140.........1150.......
Predicted Secondary structure 


Query SS confidence 























Query Sequence  VEELIARLAQKARAAGIHLVLATQ
Query Conservation                          
Alig confidence 























Template Conservation         
          

 
 
Template Sequence  VRRELFRLVARLKQIGATTVMTTE
Template Known Secondary structure  T
Template Predicted Secondary structure 


Template SS confidence 























   160.........170.........180...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions