Return to main results Retrieve Phyre Job Id

Job DescriptionP46889
Confidence67.31%DateWed Jan 25 15:20:57 GMT 2012
Rank404Aligned Residues146
% Identity15%Templatec3qz6A_
PDB info PDB header:lyaseChain: A: PDB Molecule:hpch/hpai aldolase; PDBTitle: the crystal structure of hpch/hpai aldolase from desulfitobacterium2 hafniense dcb-2
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1001........1010.........1020.........1030.........1040.........1050.........1060.... .....1070
Predicted Secondary structure 





















..........
Query SS confidence 































































. . . . . . . . . .





Query Sequence  VNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRY. . . . . . . . . . KLMSAL
Query Conservation                                                                  ..........      
Alig confidence 























































......

..........





Template Conservation      
 
    
    


       
   

 

 

  
 
 
 
 
   
 
 ......

 
 
 

         
Template Sequence  INHLVSVAKNAGVSVLVRIPQVDRAHVQRLLDIGAEGFXIPGVQSAETXRETVRLA. . . . . . KYPPLGERGVGGSIVTDF
Template Known Secondary structure  T

SS

T

TT

S......S
TTT






GGGGTT
Template Predicted Secondary structure 


















......











Template SS confidence 















































































   52.......60.........70.........80.........90.........100....... ..110.........120.....
 
   1071........1080.........1090.........1100.........1110.........1120.........1130.. .......1140...
Predicted Secondary structure 

































.......
Query SS confidence 





























































. . . . . . .










Query Sequence  GVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGK. . . . . . . KVEELIARLAQ
Query Conservation                                                                .......           
Alig confidence 

























.....








.




















.......










Template Conservation              
    
  



  .....

    

 .
  


 
 


 


 


       
 
  
   
  
Template Sequence  KPVNWAEWVQERNDEIFIXAQIEHVK. . . . . AVEDIDSIL. AVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYR
Template Known Secondary structure 



TT


.....T.TSTT


TT
TT
TT
Template Predicted Secondary structure 










......















Template SS confidence 















































































   126...130.........140.........150. ........160 .........170.........180.........190.........
 
   1144.....1150........
Predicted Secondary structure 



Query SS confidence 














Query Sequence  KARAAGIHLVLATQR
Query Conservation                 
Alig confidence 














Template Conservation 

   
   
     
Template Sequence  AADRQGVVKGFFTAA
Template Known Secondary structure  T
SS
Template Predicted Secondary structure 




Template SS confidence 














   200.........210....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions