Job Description P46889 Confidence 61.38% Date Wed Jan 25 15:20:57 GMT 2012 Rank 492 Aligned Residues 92 % Identity 17% Template c3jyvT_ PDB info PDB header:ribosome Chain: T: PDB Molecule:s19e protein; PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution Resolution 8.90 Å

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		1224	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.				1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.				.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																																								.	.	.
Query SS confidence																		.	.	.																																								.	.	.
Query Sequence		D	Q	E	V	H	A	V	V	Q	D	W	K	A	R	G	R	.	.	.	P	Q	Y	V	D	G	I	T	S	D	S	E	S	E	G	G	A	G	G	F	D	G	A	E	E	L	D	P	L	F	D	Q	A	V	Q	F	V	T	E	.	.	.	K	R	K	A	S	I	S	G	V	Q	R	Q	F	R	I	G	Y	N	R
Query Conservation																		.	.	.																																								.	.	.
Alig confidence																		.	.	.						.	.	.	.	.																														.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		Q	D	F	I	N	A	Y	A	S	F	L	Q	R	Q	G	K	L	E	V	P	G	Y	V	D	.	.	.	.	.	I	V	K	T	S	S	G	N	E	M	P	P	Q	D	A	E	G	W	F	Y	K	R	A	A	S	V	A	R	H	I	Y	M	R	K	Q	V	G	V	G	K	L	N	K	L	Y	G	G	A	K	S	R
Template Known Secondary structure													T	T	S	T	T					S		G	G	.	.	.	.	.	G	T	S	T	T	T	S					T	T	T				S															T			S		S	G	G	G	T	S	S	S	S			T	T	T
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		1298															.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	I	I	E	Q	M	E	A	Q	G	I	V	S	E	Q	G	H	N	G	N	R
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	R	P	Y	K	H	I	D	A	S	G	S	I	N	R	K	V	L	Q	A	L	E	K	I	G	I	V	E	I	S	P	K	G	G	R	R
Template Known Secondary structure					S	S	S																		T	T	T	S			B		T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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