Return to main results Retrieve Phyre Job Id

Job DescriptionP46889
Confidence84.80%DateWed Jan 25 15:20:57 GMT 2012
Rank170Aligned Residues62
% Identity18%Templatec3izbV_
PDB info PDB header:ribosomeChain: V: PDB Molecule:40s ribosomal protein rps25 (s25e); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
ResolutionNULL Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1267..1270.........1280.........1290.........1300.........1310.........1320........
Predicted Secondary structure 
























Query SS confidence 





























































Query Sequence  PLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPF
Query Conservation                                                                
Alig confidence 





























































Template Conservation      

 


 
 
 



 






  




 

 
   
 
  
    
  




 
Template Sequence  EKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPISKHSKQAIYTRATA
Template Known Secondary structure  TTTTSST

TS



SSS





Template Predicted Secondary structure 






















Template SS confidence 





























































   45....50.........60.........70.........80.........90.........100......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions