Return to main results Retrieve Phyre Job Id

Job DescriptionP46889
Confidence82.66%DateWed Jan 25 15:20:57 GMT 2012
Rank199Aligned Residues50
% Identity16%Templatec3eqxB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:fic domain containing transcriptional regulator; PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1271........1280.........1290.........1300.........1310.........1320
Predicted Secondary structure 



















Query SS confidence 

















































Query Sequence  QAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNR
Query Conservation                                                    
Alig confidence 

















































Template Conservation    
  
   
  
          
  

   
  
   
 
     

  
Template Sequence  ELVQVIFEQPYCRIQNLVESGLAKRQTASVYLKQLCDIGVLEEVQSGKEK
Template Known Secondary structure 
S
TTS

TTS
TT
Template Predicted Secondary structure 














Template SS confidence 

















































   300.........310.........320.........330.........340.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions