Job Description P46889 Confidence 92.24% Date Wed Jan 25 15:20:57 GMT 2012 Rank 68 Aligned Residues 84 % Identity 15% Template c3cuqA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex Resolution 2.61 Å

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		1222	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	D	Q	E	V	H	A	V	V	Q	D	W	K	A	R	G	R	P	Q	Y	V	D	G	I	T	S	D	S	E	S	E	G	G	A	G	G	F	D	G	A	E	E	L	D	P	L	F	D	Q	A	V	Q	F	V	T	E	K	R	K	A	S	I	S	G	V	Q	R	Q	F	R	I	G	Y	N	R	A	A	R	I
Query Conservation
Alig confidence																											.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		V	S	Q	D	D	L	I	R	A	I	K	K	L	K	A	L	G	T	G	F	G	I	I	P	V	.	.	.	.	.	.	G	G	T	Y	L	I	Q	S	V	P	A	E	L	N	M	D	H	T	V	V	L	Q	L	A	E	K	N	G	Y	V	T	V	S	E	I	K	A	S	L	K	W	E	T	E	R	A	R	Q	V
Template Known Secondary structure															G	G	G	S	T	T							.	.	.	.	.	.	T	T							S																T	T	T	S												T
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		1302	.	.	.	.	.	.	.	1310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	Q	M	E	A	Q	G	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	H	L	L	K	E	G	L	A
Template Known Secondary structure									T	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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