Job Description P46889 Confidence 95.53% Date Wed Jan 25 15:20:57 GMT 2012 Rank 28 Aligned Residues 194 % Identity 16% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.																.	.	.	.	.
Query SS confidence																																						.	.	.	.	.																.	.	.	.	.
Query Sequence		L	I	L	I	V	L	F	A	V	W	L	M	A	A	L	L	S	F	N	P	S	D	P	S	W	S	Q	T	A	W	H	E	P	I	H	N	.	.	.	.	.	L	G	G	M	P	G	A	W	L	A	D	T	L	F	F	.	.	.	.	.	I	F	G	V	M	A	Y	T	I	P	V	I	I	V	G	G	C	W	F
Query Conservation																																						.	.	.	.	.																.	.	.	.	.
Alig confidence																							.	.														.	.	.	.	.																.	.	.	.	.
Template Conservation																							.	.
Template Sequence		D	R	F	S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	.	.	I	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A	N	A	A	L	A	G	G	V	A	I	G	S	V	C
Template Known Secondary structure																						T	.	.	T	S		G	G	G																											T	T	T											T	T							T	T	T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130									.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		A	W	R	H	Q	S	S	D	E	Y	I	D	Y	F	A	V	S	L	R	I	I	G	V	L	A	L	I	L	T	S	C	G	L	A	.	.	.	.	.	.	.	.	A	I	N	A	D	D	I	W	Y	F	.	.	.	.	A	S	G	G	V	I	G	S	L	L	S	T	T	L	Q	P	L	L	H	S	S	G	G	T
Query Conservation																																				.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	V	G	.	.	.	.	.	.	.	.	.	.	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T
Template Known Secondary structure		T	T	S		.	.	.	.	.	.	.	.	.	.																					T									S					T	T						T	T														S	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		279	280	.	.											.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
			165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	A	L	L	C	V	W	A	A	G	L	T	L	F	T	G	W	S	W	V	T	I	A	E	K	L	G	G	W	I	L	N	I	L	T	F	A	S	N	R	T	R	R	D	D	T	W	V	D	E	D	E	Y	E	D	D	E	E	Y	E	D	E	N	H	G	K	Q	H	E	S	R	R	A	R	I	L	R	G	A
Query Conservation		.
Alig confidence		.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	.	.	.	.	.	.	.	.	.	.	.	.	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L	A	G	P	E	D	E	H	K	A	E	R	L	V	L	E	A	K	T	E	I	Q	G	L	K	N	R	I	D	A
Template Known Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.					T	T				S	S	T	T		G	G	G	T	S	S	S				G	G	G	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.													.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		244
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		417

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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