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Job DescriptionP46889
Confidence66.63%DateWed Jan 25 15:20:57 GMT 2012
Rank409Aligned Residues165
% Identity14%Templatec3b9bA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: structure of the e2 beryllium fluoride complex of the serca2 ca2+-atpase
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.........80.........90.........100.....
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Query Sequence  LLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDE
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Template Sequence  LLWVNLVTDGLPATAL. GFNPPDLDIMD. . . RPPRSPKEPLISGWL. . . FFRYMAIGGYVGAATVGAAAWWFMYAEDGPG
Template Known Secondary structure  TTTTT.TT



SGGGT...S



SSS
SS
...T
TTS

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   792.......800....... ..810........ .820.........830... ......840.........850.........860....
 
   106...110.........120.........130.........140.........150.........160..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . YIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSG
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Template Sequence  VTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPW. . . . VNIWLLGSICLS
Template Known Secondary structure 

TGGG

TT
TTSTT

GGGGG
TT
SSS
TTTS
TT....S
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   865....870.........880.........890.........900.........910.........920........ .930.........940
 
   163......170.........180.........190.........200.
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Query Sequence  GTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFA
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Template Sequence  MSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIG
Template Known Secondary structure  STTT




T
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   941........950.........960.........970.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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