Job Description P46889 Confidence 75.96% Date Wed Jan 25 15:20:57 GMT 2012 Rank 295 Aligned Residues 95 % Identity 13% Template c2vv5D_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:small-conductance mechanosensitive channel; PDBTitle: the open structure of mscs Resolution 3.45 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	F	F	I	F	G	V	M	A	Y	T	I	P	V	I	I	V	G	G	C	W	F	A	W	R	H	Q	S	S	D	E	Y	I	D	Y	F	A	V	S	L	R	I	I	G	V	L	A	L	I	L	T	S	C	G	L	A	A	I	N	A	D	D	I	W	Y	F	A	S	G	G	V	I	G	S	L	L	S	T	T
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		V	A	A	L	A	I	I	I	V	G	L	I	I	A	R	M	I	S	N	A	V	N	R	L	M	I	S	R	K	I	D	A	T	V	A	D	F	L	S	A	.	L	V	R	Y	G	I	I	A	F	T	L	I	A	A	L	G	R	V	G	V	Q	T	A	S	V	I	A	V	L	G	A	A	G	L	V	V	G	L	A
Template Known Secondary structure																															S											.																	T	T	T			S	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	P	L	L	H	S	S	G	G	T	I	A	L	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	G	S	L	S	N	L	A	A	G	V	L	L	V	M
Template Known Secondary structure			T														T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions