Job Description P46889 Confidence 70.52% Date Wed Jan 25 15:20:57 GMT 2012 Rank 362 Aligned Residues 165 % Identity 24% Template c2olkD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:amino acid abc transporter; PDBTitle: abc protein artp in complex with adp-beta-s Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		964	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.													.	1030	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	V	V	L	G	K	D	I	A	G	E	P	V	V	A	D	L	A	K	M	P	H	L	L	V	A	G	T	T	G	S	G	K	S	V	G	V	N	A	M	I	L	S	M	L	Y	K	A	Q	P	E	D	V	R	F	I	M	I	D	P	K	M	L	E	.	.	.	.	.	.	.	.	.	.	.	.	L	S	V
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		L	K	K	S	F	G	S	L	E	V	L	K	G	I	N	V	H	I	R	E	G	E	V	V	V	V	I	G	P	S	G	S	G	K	S	T	F	L	R	.	.	.	.	.	C	L	N	L	L	E	D	F	D	E	G	E	I	I	I	D	G	I	N	L	K	A	K	D	T	N	L	N	K	V	R	E	E	V	G	M
Template Known Secondary structure						S	S	S													T	T								S	T	T	S	S							.	.	.	.	.			T	T	S	S			S							T	T			T	T	S	T	T
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		1032	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.				.	.	.	.	.	.	1060	.	.	.		.	.	.	.	.	.	1070	.	.	.	.	.	.	.										.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.											.															.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.											.															.	.	.	.	.	.	.	.	.
Query Sequence		Y	E	G	I	P	H	L	L	T	E	V	V	T	D	M	K	D	A	A	N	A	L	.	.	.	R	W	C	V	N	E	M	E	R	R	.	Y	K	L	M	S	A	L	G	V	R	N	L	A	G	.	.	.	.	.	.	.	.	.	Y	N	E	K	I	A	E	A	D	R	M	M	R	P	I	P	D	P	Y	W	K
Query Conservation																								.	.	.											.															.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.											.															.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	Q	R	F	N	L	F	P	H	M	T	V	L	N	N	I	T	L	A	P	M	K	V	R	K	W	P	R	E	K	A	E	A	K	A	M	E	L	L	D	K	V	G	L	K	D	K	A	H	A	Y	P	D	S	L	S	G	G	Q	A	Q	R	V	A	I	A	R	A	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S			S		T	T	S													T	S																		T	T		G	G	G	T	T	S		G	G	G	S														.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		1099	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	D	S	M	D	A	Q	H	P	V	L	K	K	E	P	Y	I	V	V	L	V	D	E	F	A	D	L	M	M	T	V	G	K	K	V	E	E	L	I	A	R	L	A	Q	K	A	R	A	A	G	I	H	L	V	L	A	T	Q	R	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	L	A	M	E	P	K	I	M	L	F	D	E	P	T	S	A	L	D	P	E	M	V	G	E	V	L	S	V	M	K	Q	L	A	N	E	.	.	.	.	G	M	T	M	V	V	V	T	H	E	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		T	T			S						S	S	S	T	T	S																		T	.	.	.	.	T								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template SS confidence
													151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions