Job Description P46889 Confidence 100.00% Date Wed Jan 25 15:20:57 GMT 2012 Rank 3 Aligned Residues 392 % Identity 99% Template c2iusB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:dna translocase ftsk; PDBTitle: e. coli ftsk motor domain Resolution 2.7 Å

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		840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	S	L	D	L	L	T	P	P	P	S	E	V	E	P	V	D	T	F	A	L	E	Q	M	A	R	L	V	E	A	R	L	A	D	F	R	I	K	A	D	V	V	N	Y	S	P	G	P	V	I	T	R	F	E	L	N	L	A	P	G	V	K	A	A	R	I	S	N	L	S	R	D	L	A	R	S	L	S	T
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		L	P	S	L	D	L	L	T	P	P	T	F	.	.	.	.	.	.	.	.	A	L	E	Q	M	A	R	L	V	E	A	R	L	A	D	F	R	I	K	A	D	V	V	N	Y	S	P	G	P	V	I	T	R	F	E	L	N	L	A	P	G	V	K	A	A	R	I	S	N	L	S	R	D	L	A	R	S	L	S	T
Template Known Secondary structure					G	G	G	S						.	.	.	.	.	.	.	.															T	T	T												S	S										T	T								T	T					T	T	T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		840	.	.	.	.	.	.	.	.	.	850	.									.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.
		920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	V	R	V	V	E	V	I	P	G	K	P	Y	V	G	L	E	L	P	N	K	K	R	Q	T	V	Y	L	R	E	V	L	D	N	A	K	F	R	D	N	P	S	P	L	T	V	V	L	G	K	D	I	A	G	E	P	V	V	A	D	L	A	K	M	P	H	L	L	V	A	G	T	T	G	S	G	K	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	V	R	V	V	E	V	I	P	G	K	P	Y	V	G	L	E	L	P	N	K	K	R	Q	T	V	Y	L	R	E	V	L	D	N	A	K	F	R	D	N	P	S	P	L	T	V	V	L	G	K	D	I	A	G	E	P	V	V	A	D	L	A	K	M	P	H	L	L	V	A	G	T	T	G	S	G	A	S	V
Template Known Secondary structure		S						S			T	T	S	S	S								S	S					B						S	S					T				T	T								T	T	S							G	G	G	S		S							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.
		1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	N	A	M	I	L	S	M	L	Y	K	A	Q	P	E	D	V	R	F	I	M	I	D	P	K	M	L	E	L	S	V	Y	E	G	I	P	H	L	L	T	E	V	V	T	D	M	K	D	A	A	N	A	L	R	W	C	V	N	E	M	E	R	R	Y	K	L	M	S	A	L	G	V	R	N	L	A	G	Y	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	N	A	M	I	L	S	M	L	Y	K	A	Q	P	E	D	V	R	F	I	M	I	D	P	K	M	L	E	L	S	V	Y	E	G	I	P	H	L	L	T	E	V	V	T	D	M	K	D	A	A	N	A	L	R	W	C	V	N	E	M	E	R	R	Y	K	L	M	S	A	L	G	V	R	N	L	A	G	Y	N
Template Known Secondary structure												T	T			T	T	T								T	T	S	S	S	S	G	G	G	T	T		T	T	B	S	S	S		B		S																									T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.
		1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	I	A	E	A	D	R	M	M	R	P	I	P	D	P	Y	W	K	P	G	D	S	M	D	A	Q	H	P	V	L	K	K	E	P	Y	I	V	V	L	V	D	E	F	A	D	L	M	M	T	V	G	K	K	V	E	E	L	I	A	R	L	A	Q	K	A	R	A	A	G	I	H	L	V	L	A	T	Q	R	P
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		E	K	I	A	E	A	D	R	M	M	R	P	I	P	D	P	Y	W	H	P	V	L	.	.	.	.	.	.	.	.	.	K	K	E	P	Y	I	V	V	L	V	D	E	F	A	D	L	M	M	T	V	G	K	K	V	E	E	L	I	A	R	L	A	Q	K	A	R	A	A	G	I	H	L	V	L	A	T	Q	R	P
Template Known Secondary structure										T	T				B		T	T				B		.	.	.	.	.	.	.	.	.																																							T								S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.										.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150
		1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	V	I	T	G	L	I	K	A	N	I	P	T	R	I	A	F	T	V	S	S	K	I	D	S	R	T	I	L	D	Q	A	G	A	E	S	L	L	G	M	G	D	M	L	Y	S	G	P	N	S	T	L	P	V	R	V	H	G	A	F	V	R	D	Q	E	V	H	A	V	V	Q	D	W	K	A	R	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	D	V	I	T	G	L	I	K	A	N	I	P	T	R	I	A	F	T	V	S	S	K	I	D	S	R	T	I	L	D	Q	A	G	A	E	S	L	L	G	M	G	D	M	L	Y	S	G	P	N	S	T	L	P	V	R	V	H	G	A	F	V	R	D	Q	E	V	H	A	V	V	Q	D	W	K	A	R	G	R
Template Known Secondary structure			T	T	T	S																	S	S									S	S	S		G	G	G			S	T	T							S	S		S	S								B															T	T
Template Predicted Secondary structure
Template SS confidence
		1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.
		1240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	Y	V	D	G	I	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Q	Y	V	D	G	I	T	S
Template Known Secondary structure						S	S	S
Template Predicted Secondary structure
Template SS confidence
		1240	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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