Job Description P46889 Confidence 75.69% Date Wed Jan 25 15:20:57 GMT 2012 Rank 299 Aligned Residues 158 % Identity 18% Template c2hydB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 Resolution 3.00 Å

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		975	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.														.	1010	.	.	.	.	.	.	.	.					.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		E	P	V	V	A	D	L	A	K	M	P	H	L	L	V	A	G	T	T	G	S	G	K	S	V	G	V	N	A	M	I	L	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	K	A	Q	P	E	D	V	R	.	.	.	.	F	I	M	I	D	P	K	M	L	E	L	S	V	Y	E	G	I	P	H
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.																		.	.
Template Conservation																																																																																.	.
Template Sequence		K	D	I	N	L	S	I	E	K	G	E	T	V	A	F	V	G	M	S	G	G	G	K	S	T	L	I	N	L	I	P	R	F	Y	D	V	T	S	G	Q	I	L	I	D	G	H	N	I	K	D	F	L	T	G	S	L	R	N	Q	I	G	L	V	Q	Q	D	N	I	L	F	S	D	T	V	K	E	N	I	.	.
Template Known Secondary structure										T	T								S	T	T	S	S						T	T	T	T	T	S	S			S							T	T			G	G	G	S								T						S	S					S	S	B						.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		1038	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.						.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080		.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.
Predicted Secondary structure																					.	.	.	.	.																									.
Query SS confidence																					.	.	.	.	.																									.
Query Sequence		L	L	T	E	V	V	T	D	M	K	D	A	A	N	A	L	R	W	C	.	.	.	.	.	V	N	E	M	E	R	R	Y	K	L	M	S	A	L	G	V	R	N	L	A	G	Y	N	E	.	K	I	A	E	A	D	R	M	M	R	P	I	P	D	P	Y	W	K	P	G	D	S	M	D	A	Q	H	P	V	L	K
Query Conservation																					.	.	.	.	.																									.
Alig confidence																					.	.	.	.	.																									.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	G	R	P	T	A	T	D	E	E	V	V	E	A	A	K	M	A	N	A	H	D	F	I	M	N	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	K	L	S	G	G	Q	K	Q	R	L	S	I	A	R	I	F	L	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G		S	S													T	T							T	S	T	T	G	G	G		B			G	G	G	T	T	S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		1112	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	P	Y	I	V	V	L	V	D	E	F	A	D	L	M	M	T	V	G	K	K	V	E	E	L	I	A	R	L	A	Q	K	A	R	A	A	G	I	H	L	V	L	A	T	Q	R	P	S	V
Query Conservation
Alig confidence		.	.																															.	.	.	.	.
Template Conservation		.	.																															.	.	.	.	.
Template Sequence		.	.	P	P	I	L	I	L	D	E	A	T	S	A	L	D	L	E	S	E	S	I	I	Q	E	A	L	D	V	L	S	K	.	.	.	.	.	D	R	T	T	L	I	V	A	H	R	L	S	T
Template Known Secondary structure		.	.		S						S	T	T	T	T																	T	T	.	.	.	.	.	T	S							S	S	G	G	G
Template Predicted Secondary structure		.	.																															.	.	.	.	.
Template SS confidence
				496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.						.	.	.	.	530	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions