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Job DescriptionP46889
Confidence84.11%DateWed Jan 25 15:20:57 GMT 2012
Rank174Aligned Residues126
% Identity21%Templatec2fnaA_
PDB info PDB header:atp-binding proteinChain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus2 solfataricus p2 at 2.00 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   985....990.........1000.........1010.........1020.........1030.........1040.........1050.........1060....
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Query Sequence  PHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRY
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Template Sequence  PITLVLGLRRTGKSSIIKIGINELNLP. . . . . . . . . . . . . . . . . . YIYLDLRKFEERNYISYKDFLLELQKEINKLVKRL
Template Known Secondary structure  SSTTSST

..................GGGGTT
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   30.........40.........50...... ...60.........70.........80.........90.
 
   1065....1070 .........1080.........1090.........1100.........1110.........1120........
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Query Sequence  KLMSAL. . . . . . . . . . . . . . . . GVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMM
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Template Sequence  PSLLKALKNIQGIVIXGNEIKFNRLSFANLLESFEQ. . . . . . . . . . . . . . . . . . . . . . . . . . ASKDNVIIVLDEAQELVK
Template Known Secondary structure  TTTTTSTT
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TGGGGGG
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   92.......100.........110.........120....... ..130.........140.....
 
   11291130.........1140.........1150......
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Query Sequence  TVGKKVEELIARLAQKARAAGIHLVLAT
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Template Sequence  LRGVNLLPALAYAYDNLK. . RIKFIXSG
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T..T
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   151........160........ .170......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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