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Job DescriptionP46889
Confidence88.96%DateWed Jan 25 15:20:57 GMT 2012
Rank109Aligned Residues159
% Identity15%Templatec2d2fA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:sufc protein; PDBTitle: crystal structure of atypical cytoplasmic abc-atpase sufc from thermus2 thermophilus hb8
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   975....980.........990.........1000.........1010.........1020.... .....1030.........1040..
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Query Sequence  EPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDP. . . . . . . . . . KMLELSVYEGIPHLLTEV. .
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Template Sequence  KGVNLVVPKGEVHALMGPNGAGKSTLGKIL. . AGDPEYTVERGEILLDGENILELSPDERARKGLFLAFQYPVEVPGVTI
Template Known Secondary structure  TT

SSSSS..T
TT
TT
TTS
TTB






TT

S
B
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   20.........30.........40......... 50.........60.........70.........80.........90.......
 
   1043......1050.........1060.........1070.........1080 .........1090.........1100.......
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Query Sequence  . . . . . . . . . . . . . . VTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNE. KIAEADRMMRPIPDPYWKPGDSMDAQH
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Template Sequence  ANFLRLALQAKLGREVGVAEFWTKVKKALELLDWDESYLSRYLNEGFSGGEKKRNEILQLLVLE. . . . . . . . . . . . . . . .
Template Known Secondary structure  TS


T

GGGGGSBTTTT


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   98.100.........110.........120.........130.........140.........150.........160.
 
   1108.1110.........1120.........1130.........1140.........1150.........1160.
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Query Sequence  PVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSV
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Template Sequence  . . . . . . PTYAVLDETDSGLDIDALKVVARGVNAM. . . . RGPNFGALVITHYQRI
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S
GGGTT
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BTTBSSSGG
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   162.......170.........180......... 190.........200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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