Job Description P46889 Confidence 90.49% Date Wed Jan 25 15:20:57 GMT 2012 Rank 90 Aligned Residues 158 % Identity 18% Template c2cbzA_ PDB info PDB header:transport Chain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1 Resolution 1.5 Å

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		975	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.		.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		E	P	V	V	A	D	L	A	K	M	P	H	L	L	V	A	G	T	T	G	S	G	K	S	V	G	V	N	A	M	I	L	S	M	L	Y	K	A	Q	P	E	D	V	R	F	I	M	I	D	P	K	M	L	E	L	S	V	Y	E	G	I	P	H	L	.	L	T	E	V	V	T	D	M	K	D	A	A	N	A	L
Query Conservation																																																																		.
Alig confidence																														.	.	.	.	.																																.
Template Conservation																														.	.	.	.	.
Template Sequence		N	G	I	T	F	S	I	P	E	G	A	L	V	A	V	V	G	Q	V	G	C	G	K	S	S	L	L	S	.	.	.	.	.	A	L	L	A	E	M	D	K	V	E	G	H	V	A	I	K	G	S	V	A	Y	V	P	Q	Q	A	W	I	Q	N	D	S	L	R	E	N	I	L	F	G	C	Q	L	E	E	P	Y
Template Known Secondary structure										T	T								S	T	T	S	S							.	.	.	.	.			T	T		S											S							S	S					S									T	T	S				T	T
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.						690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.
		1054	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070											.	.	.	.	.	.	.	.	.	1080		.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.											.
Query Sequence		R	W	C	V	N	E	M	E	R	R	Y	K	L	M	S	A	L	.	.	.	.	.	.	.	.	.	.	G	V	R	N	L	A	G	Y	N	E	.	K	I	A	E	A	D	R	M	M	R	P	I	P	D	P	Y	W	K	P	G	D	S	M	D	A	Q	H	P	V	L	K	K	E	P	Y	I	V	V	L	V	D	E
Query Conservation																			.	.	.	.	.	.	.	.	.	.											.
Alig confidence																			.	.	.	.	.	.	.	.	.	.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	S	V	I	Q	A	C	A	L	L	P	D	L	E	I	L	P	S	G	D	R	T	E	I	G	E	K	G	V	N	L	S	G	G	Q	K	Q	R	V	S	L	A	R	A	V	Y	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	I	Y	L	F	D	D	P
Template Known Secondary structure									T	T						T	T	S	T	T	G	G	G	S			S	T	T	S	B																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S						S	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		737	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.																							.	.	.	.	790	.	.	.	.
		1123	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	D	L	M	M	T	V	G	K	K	V	E	E	L	I	A	R	L	A	Q	K	A	R	A	A	G	I	H	L	V	L	A	T	Q	R	P	S	V
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		L	S	A	V	D	A	H	V	G	K	H	I	F	E	N	V	I	G	P	.	.	K	G	M	L	K	N	K	T	R	I	L	V	T	H	S	M	S	Y
Template Known Secondary structure		T	T	T	S												T	T	S	T	.	.	T	S	T	T	T	T	S							S		S	T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		795	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.			.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions