Job Description P46889 Confidence 84.03% Date Wed Jan 25 15:20:57 GMT 2012 Rank 177 Aligned Residues 182 % Identity 19% Template c1zcjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase Resolution 1.90 Å

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		1115	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160									.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.			.	1180	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.																			.	.
Query SS confidence																																																.	.	.	.	.	.	.	.																			.	.
Query Sequence		Y	I	V	V	L	V	D	E	F	A	D	L	M	M	T	V	G	K	K	V	E	E	L	I	A	R	L	A	Q	K	A	R	A	A	G	I	H	L	V	L	A	T	Q	R	P	S	.	.	.	.	.	.	.	.	V	D	V	I	T	G	L	I	K	A	N	I	P	T	R	I	A	F	.	.	T	V	S	S	K	I
Query Conservation																																																.	.	.	.	.	.	.	.																			.	.
Alig confidence																																																.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		I	S	V	V	A	V	E	S	D	P	K	Q	L	D	A	A	K	K	I	I	T	F	T	L	E	K	E	A	S	R	A	H	Q	N	G	Q	A	S	A	K	P	K	L	R	F	S	S	S	T	K	E	L	S	T	V	D	L	V	V	E	A	V	F	E	D	M	N	L	K	K	K	V	F	A	E	L	S	A	L	C
Template Known Secondary structure									S	S																									T	T												S		G	G	G	G	T	T		S								S																S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		1185	.	.	.	.	1190															.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.		.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		D	S	R	T	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	A	G	A	E	S	L	L	G	M	G	D	M	L	Y	S	G	P	N	S	T	L	P	.	V	R	V	H	G	A	F	V	R	D	Q	E	V	H	A	V	V	Q	D	W	K	A	R	G	R	P	Q	Y	V	D	G	I	T	S	D
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.											.																															.	.	.	.	.
Template Conservation																																		.	.																																										.	.	.	.	.
Template Sequence		K	P	G	A	F	L	C	T	N	T	S	A	L	N	V	D	D	I	A	S	S	T	D	R	P	Q	L	V	I	G	T	H	.	.	F	F	S	P	A	H	V	M	R	L	L	E	V	I	P	S	R	Y	S	S	P	T	T	I	A	T	V	M	S	L	S	K	K	I	G	K	I	G	V	V	V	.	.	.	.	.
Template Known Secondary structure			T	T								S	S	S							T	T	S	S		G	G	G						.	.			S	S	T	T	T										S	S																T	T						B	.	.	.	.	.
Template Predicted Secondary structure																																		.	.																																										.	.	.	.	.
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	S	E	G	G	A	G	G	F	D	G	A	E	E	L	D	P	L	F	D	Q	A	V	Q	F	V	T	E	K	R	K	A	S	I	S	G	V	Q	R	Q	F	R	I	G	Y	N	R	A	A	R	I	I	E	Q	M	E	A	Q	G	I
Query Conservation
Alig confidence		.	.	.	.																								.				.												.
Template Conservation		.	.	.	.																								.				.												.
Template Sequence		.	.	.	.	G	N	C	Y	G	F	V	G	N	R	M	L	A	P	Y	Y	N	Q	G	F	F	L	L	.	E	E	G	.	S	K	P	E	D	V	D	G	V	L	E	.	E	F	G	F	K	M	G	P	F	R	V	S	D	L	A	G	L
Template Known Secondary structure		.	.	.	.			S	T	T	T	T																	.		T	T	.												.			T		S	S
Template Predicted Secondary structure		.	.	.	.																								.				.												.
Template SS confidence
						473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.		.	.	.		.	500	.	.	.	.	.	.	.	.	.		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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