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Job DescriptionP46889
Confidence91.19%DateWed Jan 25 15:20:57 GMT 2012
Rank77Aligned Residues145
% Identity17%Templatec1yqtA_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:rnase l inhibitor; PDBTitle: rnase-l inhibitor
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   986...990.........1000..... ....1010.........1020.........1030.........1040.........1050.
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Query Sequence  HLLVAGTTGSGKSVGVNAMI. . . . . . . . . . . . . . LSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAAN
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Template Sequence  VVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRAFRGNELQNYFEKLKNGEIRPVVKPQYVDLIPKAVKGKVIE
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TTTT

STTTSTTTS



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GGGSGGG

SB
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   1052.......1060.........1070...... ...1080.........1090.........1100.........1110.........1120..
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Query Sequence  ALRWCVNEMERRYKLMSALGVRNLA. . . . . . . . . GYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDE
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Template Sequence  LLKKA. DETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRN. . . . . . . . . . . . . . . . . . . . . . AT. FYFFDE
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SSS
TT
TTTTTSBGGG

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   181.... ....190.........200.........210.........220........ .230 ......
 
   1123......1130.........1140.........1150........
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Query Sequence  . FADLMMTVGKKVEELIARLAQKARAAGIHLVLATQR
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Template Sequence  PSSYLDIRQRLNAARAIRRL. . . . SEEGKSVLVVEHD
Template Known Secondary structure  TTTT

....TT

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   237..240.........250...... ...260.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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