Job Description P46889 Confidence 87.11% Date Wed Jan 25 15:20:57 GMT 2012 Rank 134 Aligned Residues 83 % Identity 14% Template c1u5tA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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		1222	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	D	Q	E	V	H	A	V	V	Q	D	W	K	A	R	G	R	P	Q	Y	V	D	G	I	T	S	D	S	E	S	E	G	G	A	G	G	F	D	G	A	E	E	L	D	P	L	F	D	Q	A	V	Q	F	V	T	E	K	R	K	A	S	I	S	G	V	Q	R	Q	F	R	I	G	Y	N	R	A	A	R	I
Query Conservation
Alig confidence																			.		.			.	.	.	.	.
Template Conservation																			.		.			.	.	.	.	.
Template Sequence		V	G	L	D	D	L	E	K	S	I	D	M	L	K	S	L	E	.	C	.	F	E	.	.	.	.	.	I	F	Q	I	R	G	K	K	F	L	R	S	V	P	N	E	L	T	S	D	Q	T	K	I	L	E	I	C	S	I	L	G	Y	S	S	I	S	L	L	K	A	N	L	G	W	E	A	V	R	S	K	S	A
Template Known Secondary structure															T	T	T		.		.			.	.	.	.	.					T	T							S	S	S				T	T							T	T	T	T	T	S			B												S
Template Predicted Secondary structure																			.		.			.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.		.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		1302	.	.	.	.	.	.	.	1310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	Q	M	E	A	Q	G	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	E	M	V	A	N	G	L	L
Template Known Secondary structure								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions