Job Description P46889 Confidence 96.09% Date Wed Jan 25 15:20:57 GMT 2012 Rank 18 Aligned Residues 156 % Identity 14% Template c1szpC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament Resolution 3.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		988	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.			.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		L	V	A	G	T	T	G	S	G	K	S	V	G	V	N	A	M	I	L	S	M	L	Y	K	A	Q	P	E	.	.	D	V	R	F	I	M	I	D	P	K	M	L	E	L	S	V	Y	E	G	I	P	H	L	L	T	E	V	V	T	D	M	K	D	A	A	N	A	L	R	W	C	V	N	E	M	E	R	R	Y	K
Query Conservation																														.	.
Alig confidence																														.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	D	T	E	G	T	F	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	L	V	S	I	A	Q	R	F	G	L	D	P	D	D	A	L	N	N	V	A
Template Known Secondary structure						S	T	T	S	S												T	T	S		T	T	T	T			S	S							S	S	S				G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G							T								G	G	G
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.														.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		1066	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.				.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		L	M	S	A	L	G	V	R	N	L	A	G	Y	N	E	K	I	A	E	A	D	R	M	M	R	P	I	P	D	P	Y	W	K	P	G	D	S	M	D	A	Q	H	P	V	L	K	K	E	P	Y	I	V	V	L	V	D	E	F	A	D	L	M	.	.	.	M	T	V	G	K	K	V	E	E	L	I	A	R	L	A
Query Conservation																																																																.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	E	L	S	A	R	Q	M	H	L	A	K	F	M	R	A	L	Q
Template Known Secondary structure							S	T	T									T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										T	T	G	G	G			T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																									.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		1143	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	A	R	A	A	G	I	H	L	V	L	A	T	Q	R	P	S	V	D	V	I	T	G	L	I	K	A	N	I	P	T	R	I	A	F	T	V	S	S	K	I	D	S	R	T	I	L	D	Q	A	G	A	E	S
Query Conservation
Alig confidence																	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	A	D	Q	F	G	V	A	V	V	V	T	N	Q	.	.	.	.	.	.	V	G	G	N	.	.	.	.	.	.	.	.	.	.	.	I	M	A	H	S	S	T	T	R	L	G	F	K	K	G	K	G	C	Q
Template Known Secondary structure																	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.							S									S	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.							.	.	.	330												.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions