Job Description P46889 Confidence 68.56% Date Wed Jan 25 15:20:57 GMT 2012 Rank 386 Aligned Residues 174 % Identity 11% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.
Predicted Secondary structure																																							.	.	.																																	.	.	.	.	.
Query SS confidence																																							.	.	.																																	.	.	.	.	.
Query Sequence		L	L	E	A	L	L	I	L	I	V	L	F	A	V	W	L	M	A	A	L	L	S	F	N	P	S	D	P	S	W	S	Q	T	A	W	H	E	.	.	.	P	I	H	N	L	G	G	M	P	G	A	W	L	A	D	T	L	F	F	I	F	G	V	M	A	Y	T	I	P	V	I	I	.	.	.	.	.	V	G	G
Query Conservation																																							.	.	.																																	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.										.	.	.																																	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	.	.	.	.	.	.	.	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V
Template Known Secondary structure																							.	.	.	.	.	.	.		T	T	T	T	T	T	T	T	T	T																T			S
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360								.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		94	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		C	W	F	A	W	R	H	Q	.	.	S	S	D	E	Y	I	D	Y	F	A	V	S	L	R	I	I	G	V	L	A	L	I	L	T	S	C	G	L	A	A	I	N	A	D	D	I	W	Y	F	A	S	G	G	V	I	G	S	L	L	S	T	T	L	Q	P	L	L	H	S	S	G	G	T	I	A	L	L	C	V	W
Query Conservation										.	.
Alig confidence										.	.																																	.	.	.	.
Template Conservation																																												.	.	.	.
Template Sequence		V	E	N	V	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	.	.	.	.	P	M	A	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S	I	T	I	V	S	A	M	A	L	S	V	L	V	A	L	I	L
Template Known Secondary structure												T				S							T																T	T	T	S	T	.	.	.	.	T	T	T				G	G	G																						T	T	T
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.					.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		A	A	G	L	T	L	F	T	G	W	.	.	S	W	V	T	I	A	E	K	L	G	G	W	I	L	N	I	L	T	F	A	S	N	R	T	R
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		T	P	A	L	C	A	T	M	L	K	F	G	W	F	N	R	M	F	E	K	S	T	H	H	Y	T	D	S	V	G	G	I	L	R	S	T	G
Template Known Secondary structure									S															T
Template Predicted Secondary structure
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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