 |
Job Description | P46889 | Confidence | 78.50% | Date | Wed Jan 25 15:20:57 GMT 2012 |
Rank | 265 | Aligned Residues | 38 |
% Identity | 21% | Template | c1ny5A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcriptional regulator (ntrc family); |
PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state
|
Resolution | 2.40 Å |
|
  |   |
982 | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | M | P | H | L | L | V | A | G | T | T | G | S | G | K | S | V | G | V | N | A | M | I | L | S | M | L | Y | K | A | Q | P | E | D | V | R | F | I | M | I | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|   |
|
|   |
|
|
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   | . | . | . | . |
|
|   |
|   |
Template Sequence |   |
C | A | E | C | P | V | L | I | T | G | E | S | G | V | G | K | E | V | V | A | R | L | I | H | K | L | S | D | R | S | K | E | P | . |
. |
. |
. |
F | V | A | L | N |
Template Known Secondary structure |   |
T |
|
| S |
|  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T | T | S |
| . | . | . | . |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
. | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|