Return to main results Retrieve Phyre Job Id

Job DescriptionP31554
Confidence40.95%DateThu Jan 5 11:48:17 GMT 2012
Rank15Aligned Residues110
% Identity8%Templated2zfga1
SCOP infoTransmembrane beta-barrels Porins Porin
Resolution1.59

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   604.....610.........620.........630.........640.........650.........660.........670.........680...
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  GSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGIS
Query Conservation    
                      
                        
 
 
                         
Alig confidence 
























































.........













Template Conservation          
                               
           
    .........              
Template Sequence  NNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSK. . . . . . . . . AKDVEGIGDVDLVN
Template Known Secondary structure  TTS
STTTT
S

TTS.........TTT
Template Predicted Secondary structure 





















.........









Template SS confidence 















































































   223......230.........240.........250.........260.........270......... 280.........290...
 
   684.....690.........700.........710.. .......720..
Predicted Secondary structure 







.......
Query SS confidence 




























. . . . . . .









Query Sequence  QVGAVASWPIADRWSIVGAYYYDTNANKQ. . . . . . . ADSMLGVQYS
Query Conservation           
   
       


     .......     

 
 
Alig confidence 




























.......









Template Conservation     

  
   
    



     
              

 

 
Template Sequence  YFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQ
Template Known Secondary structure  TT


TT
TT



B
Template Predicted Secondary structure 
















Template SS confidence 













































   294.....300.........310.........320.........330.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions