Return to main results Retrieve Phyre Job Id

Job DescriptionP31554
Confidence28.85%DateThu Jan 5 11:48:17 GMT 2012
Rank19Aligned Residues105
% Identity16%Templated1qjpa_
SCOP infoTransmembrane beta-barrels OMPA-like Outer membrane protein
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   618.620.........630.........640.........650.........660.........670.........680.........690.......
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Query Sequence  ERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRW
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Template Sequence  NTWYTGAKLGWSQHENKL. GAGAFGGYQVNPYVGFEMGYDWLG. . . . . . . . . . . . RMPYAYKAQGVQLTAKLGYPITDDL
Template Known Secondary structure  T



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   5....10.........20.. .......30.........40...... ...50.........60.........70.
 
   698.700.........710... ......720.. .......730.....
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Query Sequence  SIVGAYYYDTNANKQA. . . . . . . . . . . . . . DSMLGVQYS. SCCYAIRVGYERK
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Template Sequence  DIYTRLGGMVWRADTYSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWT
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   92.......100.........110.........120.........130.........140....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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