Job Description P31554 Confidence 26.09% Date Thu Jan 5 11:48:17 GMT 2012 Rank 20 Aligned Residues 123 % Identity 16% Template d1qj8a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 1.90

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		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.		.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		R	G	G	I	Q	Y	D	T	R	L	D	N	V	A	T	S	N	S	S	I	E	Y	R	R	.	D	E	D	R	L	V	Q	L	N	Y	R	Y	A	S	P	E	Y	I	Q	A	T	L	P	K	Y	Y	S	T	A	E	Q	Y	K	N	G	I	S	Q	V	G	A	V	A	S	W	P	I	A	D	R	W	S	I	V	G
Query Conservation																										.
Alig confidence																										.																	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		Y	A	Q	S	D	A	Q	G	Q	M	N	K	M	G	G	F	N	L	K	Y	R	Y	E	E	D	N	S	P	L	G	V	I	G	S	F	T	Y	T	E	K	S	.	.	.	.	.	.	.	R	T	A	S	S	G	D	Y	N	K	N	Q	Y	Y	G	I	T	A	G	P	A	Y	R	I	N	D	W	A	S	I	Y	G
Template Known Secondary structure								T	T	T																T	T		S														.	.	.	.	.	.	.				T	T	S																				T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		702	.	.	.	.	.	.	.	710	.	.															.	.	.	.	.	.	.	720	.	.		.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		A	Y	Y	Y	D	T	N	A	N	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	S	M	L	G	V	Q	Y	S	.	S	C	C	Y	A	I	R	V	G	Y	E	R	K	L	N	G	W	D	N	D	K	Q	H	A	V	Y	D	N	A	I	G	F	N	I	E	L	R
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																					.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		V	V	G	V	G	Y	G	K	F	Q	T	T	E	Y	P	T	Y	K	N	D	T	S	D	Y	G	F	S	Y	G	A	G	L	Q	F	N	P	M	E	N	V	A	L	D	F	S	Y	E	Q	S	R	I	R	S	V	D	V	.	.	.	.	.	.	.	G	T	W	I	A	G	V	G	Y	R
Template Known Secondary structure															T	T	T																				S	S	T	T													T	T				.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions