Job Description P31554 Confidence 6.81% Date Thu Jan 5 11:48:17 GMT 2012 Rank 41 Aligned Residues 134 % Identity 11% Template d1phoa_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.									.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.
Query Sequence		V	G	Q	I	Y	Y	F	T	E	S	R	T	G	D	D	N	I	T	W	E	N	D	D	K	T	G	S	L	V	W	A	G	D	T	Y	W	R	I	S	E	R	W	G	L	R	G	G	I	Q	Y	D	T	R	L	D	.	.	.	.	.	.	.	.	N	V	A	T	S	N	S	S	I	E	Y	R	R	D	E	D	R
Query Conservation																																																									.	.	.	.	.	.	.	.
Alig confidence																																										.															.	.	.	.	.	.	.	.
Template Conservation																																										.
Template Sequence		F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q	N	L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	N	N	.	I	Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	G	F	A	N	K	T	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L
Template Known Secondary structure															G	G	G	T	T	S	S	S	S		S	S														T	T	.												S		S			S	S	S	S		S														S	S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.								710	.	.	.	.	.	.	.	.	.	720	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.
Query Sequence		L	V	Q	L	N	Y	R	Y	A	S	P	E	Y	I	Q	A	T	L	P	K	Y	Y	S	T	A	E	Q	Y	K	N	G	I	S	Q	V	G	A	V	A	S	W	P	I	A	D	R	W	S	I	V	G	A	Y	Y	Y	D	T	N	A	.	.	.	.	.	.	.	N	K	Q	A	D	S	M	L	G	V	Q	Y	S
Query Conservation																																																													.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		R	P	S	L	G	Y	V	L	S	K	.	.	.	.	.	.	.	.	.	G	K	D	I	E	G	I	G	D	E	D	L	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D	D	I	V	A	V	G	M	T	Y	Q
Template Known Secondary structure												.	.	.	.	.	.	.	.	.			S	B	T	T	T	B																S	S	S	S														S	S		T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.										280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions