Job Description P31554 Confidence 12.10% Date Thu Jan 5 11:48:17 GMT 2012 Rank 28 Aligned Residues 78 % Identity 19% Template d1m1ca_ SCOP info L-A virus major coat protein L-A virus major coat protein L-A virus major coat protein Resolution 3.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.									.
Query SS confidence																																																									.	.	.	.									.
Query Sequence		L	D	N	G	S	F	T	S	C	L	P	G	S	D	T	W	S	V	V	G	S	E	I	I	H	D	R	E	E	Q	V	A	E	I	W	N	A	R	F	K	V	G	P	V	P	I	F	Y	S	P	Y	L	Q	L	P	.	.	.	.	V	G	D	K	R	R	S	G	.	F	L	I	P	N	A	K	Y	T	T	T	N
Query Conservation																																																									.	.	.	.									.
Alig confidence																.																	.																								.	.	.	.									.
Template Conservation																.																	.
Template Sequence		M	S	D	V	Y	V	T	Y	P	D	L	L	E	F	.	D	A	V	T	Q	V	P	I	T	V	I	E	P	A	G	Y	.	N	I	V	D	D	H	L	V	V	V	G	V	P	V	A	C	S	P	Y	M	I	F	P	V	A	A	F	D	T	A	N	P	Y	C	G	N	F	V	I	K	A	A	N	K	Y	L	R	K
Template Known Secondary structure		S	S	S						G	G	G	S		S	.	S													S			.			S	T	T						S					S		T	T	T	T	T	T			S	S	S	S			T	T	S	S								S				S	S
Template Predicted Secondary structure																.																	.
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.		.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	E	F	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	V	Y	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		501	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions