 |
Job Description | P31554 | Confidence | 3.56% | Date | Thu Jan 5 11:48:17 GMT 2012 |
Rank | 70 | Aligned Residues | 74 |
% Identity | 12% | Template | c3s7eB_ |
PDB info |
PDB header:allergen | Chain: B: PDB Molecule:allergen ara h 1, clone p41b; |
PDBTitle: crystal structure of ara h 1
|
Resolution | 2.71 Å |
|
 |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | N | G | S | F | T | S | C | L | P | G | S | D | T | W | S | V | V | G | S | E | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | H | D | R | E | E | Q | V | A | E | I | W | N | A | R | F | K | V | G | P | V | P | I | F | Y | S | P | Y | L | Q | L | P | V | G | D | K | R | R | S | G | F | L | I | P | N | A | K |
Query Conservation |   |
|   |   |   |   |   |
|
|
|   |   |   |   |
|   |
|   |
|   |
|   |   |
| . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |
|
|
|   |   |
|
|
|
|   |
|
|   |
|
|   |
|
|   |   |
|   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|
| . |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
Template Sequence |   |
L | T | C | V | E | I | K | E | G | A | L | M | L | P | H | F | N | S | K | A | M | V | I | V | V | V | N | K | G | T | G | N | L | E | L | V | A | V | R | S | N | R | E | V | R | R | Y | T | A | R | L | K | E | G | D | V | F | I | M | P | A | . |
A | H | P | V | A | I | N | A | S | S | E | L | H | L | L | G | F | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| T | . | T |
|
|  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
433 | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | |
. | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . |
  |
  |   |
235 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
Y | T | T | T | N |
Query Conservation |   |
  |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
Template Sequence |   |
I | N | A | E | N |
Template Known Secondary structure |   |
 | S |
| T | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
  |   |
533 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|