Job Description P31554 Confidence 22.13% Date Thu Jan 5 11:48:17 GMT 2012 Rank 23 Aligned Residues 105 % Identity 16% Template c3nb3C_ PDB info PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components Resolution 19.00 Å

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		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	W	G	L	R	G	G	I	Q	Y	D	T	R	L	D	N	V	A	T	S	N	S	S	I	E	Y	R	R	D	E	D	R	L	V	Q	L	N	Y	R	Y	A	S	P	E	Y	I	Q	A	T	L	P	K	Y	Y	S	T	A	E	Q	Y	K	N	G	I	S	Q	V	G	A	V	A	S	W	P	I	A	D	R	W
Query Conservation
Alig confidence																						.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	W	Y	T	G	A	K	L	G	W	S	Q	H	E	N	K	L	G	A	.	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	.	.	.	.	.	.	.	.	.	.	.	.	R	M	P	Y	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L
Template Known Secondary structure		T																				.										T	T												.	.	.	.	.	.	.	.	.	.	.	.																					S	S	S	S
Template Predicted Secondary structure																						.																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.													.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.															.	.	.	.	.	.	720	.	.		.	.	.	.	.	.	.	730	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		S	I	V	G	A	Y	Y	Y	D	T	N	A	N	K	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	M	L	G	V	Q	Y	S	.	S	C	C	Y	A	I	R	V	G	Y	E	R	K
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	Y	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T
Template Known Secondary structure																			S	S	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions