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Job Description | P31554 | Confidence | 22.13% | Date | Thu Jan 5 11:48:17 GMT 2012 |
Rank | 23 | Aligned Residues | 105 |
% Identity | 16% | Template | c3nb3C_ |
PDB info |
PDB header:virus | Chain: C: PDB Molecule:outer membrane protein a; |
PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components
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Resolution | 19.00 Å |
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618 | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | R | W | G | L | R | G | G | I | Q | Y | D | T | R | L | D | N | V | A | T | S | N | S | S | I | E | Y | R | R | D | E | D | R | L | V | Q | L | N | Y | R | Y | A | S | P | E | Y | I | Q | A | T | L | P | K | Y | Y | S | T | A | E | Q | Y | K | N | G | I | S | Q | V | G | A | V | A | S | W | P | I | A | D | R | W |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | T | W | Y | T | G | A | K | L | G | W | S | Q | H | E | N | K | L | G | A | . |
G | A | F | G | G | Y | Q | V | N | P | Y | V | G | F | E | M | G | Y | D | W | L | G | . |
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R | M | P | Y | A | Y | K | A | Q | G | V | Q | L | T | A | K | L | G | Y | P | I | T | D | D | L |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
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. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
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698 | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | I | V | G | A | Y | Y | Y | D | T | N | A | N | K | Q | A | . |
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D | S | M | L | G | V | Q | Y | S | . |
S | C | C | Y | A | I | R | V | G | Y | E | R | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | I | Y | T | R | L | G | G | M | V | W | R | A | D | T | Y | S | N | V | Y | G | K | N | H | D | T | G | V | S | P | V | F | A | G | G | V | E | Y | A | I | T | P | E | I | A | T | R | L | E | Y | Q | W | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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