Job Description P31554 Confidence 95.88% Date Thu Jan 5 11:48:17 GMT 2012 Rank 5 Aligned Residues 183 % Identity 11% Template c3brzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx Resolution 3.20 Å

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		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	I	S	V	G	Q	I	Y	Y	F	T	E	S	R	T	G	D	D	N	I	T	W	E	N	D	D	K	T	G	S	L	V	W	A	G	D	T	Y	W	R	I	S	E	R	W	G	L	R	G	G	I	Q	Y	D	T	R	L	D	N	V	A	T	S	N	S	S	I	E	Y	R	R	D	E	D	R	L	V	Q	L
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		W	G	G	R	L	G	L	T	Y	K	L	T	D	.	N	T	V	L	G	A	M	Y	N	F	K	T	S	V	G	D	L	E	G	K	A	T	L	S	A	I	S	G	D	G	A	V	L	P	L	D	G	D	I	R	V	K	N	F	E	M	P	A	S	L	T	L	G	L	A	H	Q	F	N	E	R	W	V	V	A	A
Template Known Secondary structure													S	S	.	S											B																T	T	S																B												S	S	S	S
Template Predicted Secondary structure															.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		655	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.									.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.							.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure																									.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Query Sequence		N	Y	R	Y	A	S	P	E	Y	I	Q	A	T	L	P	K	Y	Y	S	T	A	E	Q	.	.	.	.	.	.	.	.	Y	K	N	G	I	S	Q	V	G	A	V	A	S	W	P	I	A	D	R	W	S	I	V	G	A	Y	Y	Y	D	.	.	.	.	.	.	T	N	A	N	K	Q	A	D	S	M	L	G	V	Q
Query Conservation																									.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	K	R	A	Y	W	G	D	V	M	D	S	M	N	V	A	F	I	S	Q	L	G	G	I	D	V	A	L	P	H	R	Y	Q	D	I	T	V	A	S	I	G	T	A	Y	K	Y	N	N	D	L	T	L	R	A	G	Y	S	Y	A	Q	L	I	L	P	V	I	P	A	Y	L	K	R	H	V	T	F	G	G	E
Template Known Secondary structure									T	T			S									S	S																									S	S	S	S															T	T	S					S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		721	.	.		.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		Y	S	S	.	C	C	Y	A	I	R	V	G	Y	E	R	K	L	N	G	W	D	N	D	K	Q	H	A	V	Y	D	N	A	I	G	F	N	I	E	L	R
Query Conservation					.
Alig confidence					.																												.
Template Conservation																																	.
Template Sequence		Y	D	F	D	K	D	S	R	I	N	L	A	I	S	F	G	L	R	E	R	V	M	L	R	Q	S	H	S	Q	I	N	.	A	V	V	S	Y	S	K	N
Template Known Secondary structure				S	S	S	S																							B			.
Template Predicted Secondary structure																																	.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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