Job Description P31554 Confidence 95.44% Date Thu Jan 5 11:48:17 GMT 2012 Rank 6 Aligned Residues 146 % Identity 16% Template c3bryB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:tbux; PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux Resolution 3.20 Å

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		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.																											.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	A	G	D	T	Y	W	R	I	S	E	R	W	G	L	R	G	G	I	Q	Y	D	T	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	V	A	T	S	N	S	S	I	E	Y	R	R	D	E	D	R	L	V	Q	L	N	Y	R	Y	A	S	P
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	L	G	L	T	Y	Q	V	T	P	D	T	R	I	G	A	A	Y	Q	A	K	T	H	V	G	D	L	T	G	Q	A	T	L	S	A	V	G	N	I	P	L	K	G	D	V	T	V	R	N	F	Q	M	P	A	Q	L	T	V	G	I	S	H	Q	F	N	D	Q	L	S	V	S	A	D	Y	Q	R	V	F	W
Template Known Secondary structure												T	T											B	B											B																		B												S	S	S	S												G
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.											680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.		.	.	.	.	.	730
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																																														.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.																																														.
Query Sequence		E	Y	I	Q	A	T	L	P	K	Y	Y	S	T	A	E	Q	Y	K	.	.	.	.	.	.	.	.	.	.	N	G	I	S	Q	V	G	A	V	A	S	W	P	I	A	D	R	W	S	I	V	G	A	Y	Y	Y	D	T	N	A	N	K	Q	A	D	S	M	L	G	V	Q	Y	S	S	C	.	C	Y	A	I	R	V
Query Conservation																				.	.	.	.	.	.	.	.	.	.																																														.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																												.	.	.																.
Template Conservation																																																									.	.	.
Template Sequence		S	S	V	M	K	D	M	N	V	G	F	V	Q	S	G	S	A	A	N	L	D	L	S	L	P	Q	N	Y	R	D	I	S	V	F	G	I	G	A	E	Y	R	Y	N	A	K	W	T	F	R	G	G	F	H	Y	A	.	.	.	Q	E	T	T	S	L	T	G	G	V	S	Y	A	I	G	K	N	D	V	I	D	F
Template Known Secondary structure		G	G			S									S	S	S																												T	T											.	.	.														S	S	T	T
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.				360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		731	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	E	R	K	L	N	G	W	D	N	D	K	Q	H	A	V	Y	D	N	A	I	G	F	N	I	E	L
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		A	L	S	V	A	L	R	K	.	.	T	S	V	T	H	S	Q	V	N	A	V	I	A	Y	Q	K	R	F
Template Known Secondary structure									B	.	.
Template Predicted Secondary structure										.	.
Template SS confidence
		397	.	.	400	.	.	.	.			.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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