Job Description P31554 Confidence 2.48% Date Thu Jan 5 11:48:17 GMT 2012 Rank 96 Aligned Residues 45 % Identity 16% Template c2wff2_ PDB info PDB header:virus Chain: 2: PDB Molecule:p1; PDB Fragment:capsid protein vp2, residues 81-310; PDBTitle: equine rhinitis a virus Resolution 4.00 Å

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		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.													.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		F	K	V	G	P	V	P	I	F	Y	S	P	Y	L	Q	L	P	V	G	D	K	.	.	.	.	.	.	.	.	.	.	.	.	R	R	S	G	F	L	I	P	N	.	.	A	K	Y	T	T	T	N	Y	F	E	F	Y	L	P	Y
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		A	H	S	G	A	L	C	V	A	A	V	P	E	Y	E	H	T	H	E	K	A	L	K	W	S	E	L	E	E	P	A	Y	T	Y	Q	Q	L	S	V	F	P	H	Q	L	L	N	L	R	T	N	S	S	V	H	L	V	M	P	Y
Template Known Secondary structure		S												T				G	G	G			S			B						S						G	G	G	S	S						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions