Job Description P31554 Confidence 39.23% Date Thu Jan 5 11:48:17 GMT 2012 Rank 16 Aligned Residues 200 % Identity 11% Template c2iwvD_ PDB info PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation Resolution 2.3 Å

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		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	G	L	D	R	I	A	S	A	N	Q	V	T	T	G	V	T	S	R	I	Y	D	D	A	A	V	E	R	F	N	I	S	V	G	Q	I	Y	Y	F	T	E	S	R	T	G	D	D	N	I	T	W	E	N	D	D	K	T	G	S	L	V	W	A	G	D	T	Y	W	R	I	S	E	R	W	G	L	R	G	G
Query Conservation
Alig confidence																													.																.	.	.	.
Template Conservation																													.																.	.	.	.
Template Sequence		Y	S	A	G	K	R	G	T	W	F	D	R	P	E	L	E	V	H	Y	Q	F	L	E	N	D	D	F	.	S	F	G	L	T	G	G	F	R	N	Y	G	Y	H	Y	.	.	.	.	V	D	E	P	G	K	D	T	A	N	M	Q	R	W	K	I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W
Template Known Secondary structure		T	T	T	T				S																	S	S		.																.	.	.	.	S	S		T	T																				S	S	S
Template Predicted Secondary structure																													.																.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		626	.	.	.	630	.										.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	Y	D	T	R	.	.	.	.	.	.	.	.	.	L	D	N	V	A	T	S	N	S	S	I	E	Y	R	R	D	E	D	R	L	V	Q	L	N	Y	R	Y	A	S	P	E	Y	I	Q	A	T	L	P	K	Y	Y	S	T	A	E	Q	Y	K	N	G	I	S	Q	V	G	A	V	A	S	W	P	I	A	D	R
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.																											.
Template Conservation																																																.	.	.	.	.	.	.																											.
Template Sequence		L	S	M	Y	K	F	A	N	D	L	N	T	T	G	Y	A	D	T	R	V	E	T	E	T	G	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	Y	L	E	R	G	F	.	.	.	.	.	.	.	N	M	D	D	S	R	N	N	G	E	F	S	T	Q	E	I	R	A	Y	L	P	L	T	L	G	N	.
Template Known Secondary structure									S									S														S	S	S	B													.	.	.	.	.	.	.		S	S	T	T			T	T																T	T	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.																											.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		697	.	.	700	.	.	.	.	.	.	.													.	.	710	.	.	.	.	.	.	.	.	.	720	.	.				.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		W	S	I	V	G	A	Y	Y	Y	D	T	.	.	.	.	.	.	.	.	.	.	.	.	N	A	N	K	Q	A	D	S	M	L	G	V	Q	Y	S	.	.	.	S	C	C	Y	A	I	R	V	G	Y	E	R	K	L	N	G	W	D	N	D	K	Q	H	A	V	Y	D	N	A	I	G	F	N	I	E	L
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		H	S	V	T	P	Y	T	R	I	G	L	D	R	W	S	N	W	D	W	Q	D	D	I	E	R	E	G	H	D	F	N	R	V	G	L	F	Y	G	Y	D	F	Q	N	G	L	S	V	S	L	E	Y	A	F	E	W	Q	D	H	D	E	G	D	S	D	K	F	H	Y	A	G	V	G	V	N	Y	S	F
Template Known Secondary structure																		T	T	T	T	T			S																		S	S	S															S	S	S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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