Return to main results Retrieve Phyre Job Id

Job DescriptionP31554
Confidence2.89%DateThu Jan 5 11:48:17 GMT 2012
Rank85Aligned Residues146
% Identity14%Templatec1xkwA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:fe(iii)-pyochelin receptor; PDBTitle: pyochelin outer membrane receptor fpta from pseudomonas2 aeruginosa
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   553......560.........570....... ..580.........590.........600.........610.........620........
Predicted Secondary structure 







....























Query SS confidence 
























. . . .


















































Query Sequence  ASANQVTTGVTSRIYDDAAVERFNI. . . . SVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQY
Query Conservation     
 
  


 
     
 
    .... 


                        
                      
Alig confidence 
























....


















































Template Conservation 
     
 
                                         
       
 
                 
 
Template Sequence  VEGKTYETGIKGELADGRLNLSLAAFRIDLENNPQEDPDHPGPPNNPFYISGGKVRSQGFELEGTGYLTPYWSLSAGYTY
Template Known Secondary structure  GGGT
SSS

STT


TT
Template Predicted Secondary structure 













Template SS confidence 















































































   518.520.........530.........540.........550.........560.........570.........580.........590.......
 
   629630..... ....640....... ..650.........660.........670.........680.........
Predicted Secondary structure 




................

...
























Query SS confidence 






. . . . . . . . . . . . . . . .











. . .









































Query Sequence  DTRLDNV. . . . . . . . . . . . . . . . ATSNSSIEYRRD. . . EDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVA
Query Conservation 
      ................            ...      
 
 
                               
Alig confidence 






................











...















......



















Template Conservation                       
         
                
     ......            
   
   
Template Sequence  TSTEYLKDSQNDSGTRYSTFTPRHLLRLWSNYDLPWQDRRWSVGGGLQAQSDYS. . . . . . VDYRGVSMRQGGYALVNMRL
Template Known Secondary structure 
TTS
TT
BS
TTS
S
S


......TT

Template Predicted Secondary structure 






















......







Template SS confidence 















































































   598.600.........610.........620.........630.........640.........650. ........660.........670.
 
   690.........700....
Predicted Secondary structure 


Query SS confidence 














Query Sequence  SWPIADRWSIVGAYY
Query Conservation     
   
       
Alig confidence 














Template Conservation   
       
 
 
 
Template Sequence  GYKIDEHWTAAVNVN
Template Known Secondary structure  SSSS
Template Predicted Secondary structure 



Template SS confidence 














   672.......680......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions