Job Description P31554 Confidence 4.47% Date Thu Jan 5 11:48:17 GMT 2012 Rank 63 Aligned Residues 94 % Identity 13% Template c1h4uA_ PDB info PDB header:extracellular matrix protein Chain: A: PDB Molecule:nidogen-1; PDBTitle: domain g2 of mouse nidogen-1 Resolution 2.2 Å

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		103	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																																																				.	.	.
Query SS confidence										.																																																				.	.	.
Query Sequence		T	V	D	A	L	G	N	V	.	H	Y	D	D	N	Q	V	I	L	K	G	P	K	G	W	A	N	L	N	T	K	D	T	N	V	W	E	G	D	Y	Q	M	V	G	R	Q	G	R	G	K	A	D	L	M	K	Q	R	G	E	N	R	.	.	.	Y	T	I	L	D	N	G	S	F	T	S	C	L	P	G	S	D
Query Conservation										.																																																				.	.	.
Alig confidence										.																		.																	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																												.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	E	L	E	G	R	V	P	Q	I	P	Y	G	A	S	V	H	I	E	P	Y	T	E	L	Y	.	H	Y	S	S	S	V	I	T	S	S	S	T	R	E	Y	T	.	.	.	.	.	.	.	.	.	.	V	M	E	P	P	S	H	T	H	I	Y	Q	W	R	Q	T	I	T	F	Q	E	C	P	A	L	P	S
Template Known Secondary structure														T	T													.				S	S												.	.	.	.	.	.	.	.	.	.																											S
Template Predicted Secondary structure																												.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560											.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		T	W	S	V	V	G	S	E	I	.	.	I	H	D	R	E	E	Q	V	A	E	I	W	N	A	R	F	K	V	G	P	V
Query Conservation											.	.
Alig confidence											.	.												.
Template Conservation																								.
Template Sequence		T	Q	Q	L	S	V	D	S	V	F	V	L	Y	N	K	E	E	R	I	L	R	Y	.	A	L	S	N	S	I	G	P	V
Template Known Secondary structure																T	T	T	T					.
Template Predicted Secondary structure																								.
Template SS confidence
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.		.	.	.	.	.	.	.	.	630

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions