Return to main results Retrieve Phyre Job Id

Job DescriptionP52045
Confidence99.18%DateThu Jan 5 12:04:59 GMT 2012
Rank79Aligned Residues177
% Identity15%Templated2f9ya1
SCOP infoClpP/crotonase ClpP/crotonase Biotin dependent carboxylase carboxyltransferase domain
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20. ........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 

........
























Query SS confidence 







. . . . . . . .































































Query Sequence  VAVIEFNY. . . . . . . . GRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPL
Query Conservation 
  
 


........
   


       
         
     

        



 

                 
Alig confidence 







........







































...........












Template Conservation 
 


 
 
           
   
 
 


 
   

    



 



 

  ...........    
  
    
Template Sequence  VMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYP. . . . . . . . . . . GVGAEERGQSEAI
Template Known Secondary structure 


SSTTTGGG


TT

S
S

...........STT
Template Predicted Secondary structure 
























...........





Template SS confidence 















































































   113......120.........130.........140.........150.........160........ .170.........180.
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  RQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTAS
Query Conservation        
     
 

 
 
 
 


  

 
 
 


   
 
  

   
  
  
    
    
   
  
 
 
 
Alig confidence 













































......























....
Template Conservation 
          

 



 
    


 
 
 

 


   
  

......  

  
 

 

   
  

  
....
Template Sequence  ARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSV. . . . . . ISPEGCASILWKSADKAPLAAEAM. . . .
Template Known Secondary structure  T
SS
TT


S
TT
S......S
SS
STT....
Template Predicted Secondary structure 











......






....
Template SS confidence 















































































   182.......190.........200.........210.........220....... ..230.........240.........250.
 
   166...170.........180... ......190.........200.........210.
Predicted Secondary structure 







.............






Query SS confidence 

















. . . . . . . . . . . . .



























Query Sequence  PITAQRALAVGILNHVVE. . . . . . . . . . . . . VEELEDFTLQMAHHISEKAPLAIAVIKE
Query Conservation     
 

   


  

 .............       
   
  

     
    
 
Alig confidence 

















.............



























Template Conservation   


  
   



 

 
  


       
  
  

   
  
       
   
 
Template Sequence  GIIRPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDLKNRRY
Template Known Secondary structure  T
STTTS
S




STT
GGG
TTTTTTS
Template Predicted Secondary structure 




















Template SS confidence 


























































   252.......260.........270.........280.........290.........300.........310
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions