Return to main results Retrieve Phyre Job Id

Job DescriptionP52045
Confidence98.87%DateThu Jan 5 12:04:59 GMT 2012
Rank89Aligned Residues151
% Identity16%Templated1on3a1
SCOP infoClpP/crotonase ClpP/crotonase Biotin dependent carboxylase carboxyltransferase domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  VAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQ
Query Conservation 
  
 



   


       
         
     

        



 

                       
 
Alig confidence 















































..............

















Template Conservation 
 
 
 
 
  


       
  
   

    



 
 





 .............. 
          
     
Template Sequence  VHAASQDFTVMGGSAGETQSTKVVETMEQALLTGTPFLFFYDSGGARI. . . . . . . . . . . . . . QEGIDSLSGYGKMFFANV
Template Known Secondary structure 
TTTGGG
B
T


SB
G..............GGT
Template Predicted Secondary structure 
















..............
Template SS confidence 















































































   98.100.........110.........120.........130.........140..... ....150.........160...
 
   94.. ...100.........110.........120.........130.........140.........150.........160.........170.
Predicted Secondary structure 

..






























Query SS confidence 


. .










































































Query Sequence  KFP. . KPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQR
Query Conservation     .. 
 

 
 
 
 


  

 
 
 


   
 
  

   
  
  
    
    
   
  
 
 
    
 
Alig confidence 


..

































....................







..










Template Conservation    
  

 
 

 
   

 
      
 


   
 
 ....................  

 

 ..   

 
  
 
Template Sequence  KLSGVVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMF. . . . . . . . . . . . . . . . . . . . ITGPQVIK. . SVTGEDVTADE
Template Known Secondary structure  TTTS
SGGGSSTT
....................SS
..




Template Predicted Secondary structure 














....................
..




Template SS confidence 















































































   164.....170.........180.........190.........200.. .......210 .........220.
 
   172.......180.........190.........200...
Predicted Secondary structure  .......











Query SS confidence  . . . . . . .































Query Sequence  . . . . . . . ALAVGILNHVVEVEELEDFTLQMAHHISEKAP
Query Conservation  .......
   


  

        
   
  

    
Alig confidence  .......













...














Template Conservation 



  
   

  
 

 

...  
    
  

 

Template Sequence  LGGAEAHMAISGNIHFVAEDD. . . DAAELIAKKLLSFLP
Template Known Secondary structure  STT


SSS...TS
Template Predicted Secondary structure 









...

Template SS confidence 






































   222.......230.........240.. .......250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions