Job Description P52045 Confidence 100.00% Date Thu Jan 5 12:04:59 GMT 2012 Rank 2 Aligned Residues 260 % Identity 25% Template c3r0oA_ PDB info PDB header:lyase Chain: A: PDB Molecule:carnitinyl-coa dehydratase; PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	Y	Q	Y	V	N	V	V	T	I	N	K	V	A	V	I	E	F	N	Y	G	R	K	L	N	A	L	S	K	V	F	I	D	D	L	M	Q	A	L	S	D	L	N	R	P	E	I	R	C	I	I	L	R	A	P	S	G	S	K	V	F	S	A	G	H	D	I	H	E	L	P	S	G	G	R	D	P	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	R	Q	A	A	V	V	E	R	R	G	N	V	A	L	I	T	I	D	R	P	D	A	R	N	A	V	N	G	A	V	S	T	A	V	G	D	A	L	E	E	A	Q	R	D	P	E	V	W	A	V	V	I	T	G	A	G	D	K	S	F	C	A	G	A	D	L	K	A	I	S	R	G	E	N	L	Y	H	A
Template Known Secondary structure				S		S							T	T									G	G	G	T	T		B																			T	T									S	S	S	S	B	S				B							T	T				S		S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	D	P	L	R	Q	I	T	R	M	I	Q	K	F	P	K	P	I	I	S	M	V	E	G	S	V	W	G	G	A	F	E	M	I	M	S	S	D	L	I	I	A	A	S	T	S	T	F	S	M	T	P	V	N	L	G	V	P	Y	N	L	V	G	I	H	N	L	T	R	D	A	G	F	H	I	V	K	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	P	E	W	G	F	A	G	Y	V	H	H	F	I	D	K	P	T	I	A	A	V	N	G	T	A	L	G	G	G	S	E	L	A	L	A	S	D	L	V	I	A	C	E	S	A	S	F	G	L	P	E	V	K	R	G	L	I	A	G	A	G	G	V	F	R	I	V	E	Q	L	P	R	K	V	A	L	E	L
Template Known Secondary structure		S		G	G	G		G	G	G	T	T	T				S	S								S	B			T									S	S						T	T						G	G	G	G	T	T	S			T	T	T									S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		I	F	T	A	S	P	I	T	A	Q	R	A	L	A	V	G	I	L	N	H	V	V	E	V	E	E	L	E	D	F	T	L	Q	M	A	H	H	I	S	E	K	A	P	L	A	I	A	V	I	K	E	E	L	R	V	L	G	E	A	H	.	T	M	N	S	D	E	F	E	R	I	Q	G	M	R	R	A	V	Y	D
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		V	L	T	G	E	P	M	T	A	S	D	A	L	R	W	G	L	I	N	E	V	V	P	D	G	T	V	V	E	A	A	L	A	L	A	E	R	I	T	C	N	A	P	L	S	V	Q	A	S	K	R	V	A	Y	G	A	D	D	G	I	I	G	A	E	E	P	K	W	E	R	T	I	R	E	F	T	E	L	L	K
Template Known Secondary structure																	T	S	S	S					T	T															T	S														T			T	T			G	G	G																T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	D	Y	Q	E	G	M	N	A	F	L	E	K	R	K	P	N	F	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	D	A	K	E	G	P	L	A	F	A	E	K	R	Q	P	V	W	K	A
Template Known Secondary structure		S											T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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