Job Description P52045 Confidence 99.07% Date Thu Jan 5 12:04:59 GMT 2012 Rank 81 Aligned Residues 140 % Identity 13% Template c3kthD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form Resolution 3.00 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	K	V	F	I	D	D	L	M	Q	A	L	S	D	L	N	R	P	E	I	R	C	I	I	L	R	A	P	S	G	S	K	V	F	S	A	G	H	D	I	H	E	L	P	S	G	G	R	D	P	L	S	Y	D	D	P	L	R	Q	I	T	R	M	I	Q	K	F	P	K	P	I	I	S	M	V	E	G	S	V
Query Conservation
Alig confidence																														.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	D	N	V	A	N	S	I	V	S	Q	L	L	F	L	A	A	E	D	P	E	K	E	I	S	L	Y	.	.	.	.	.	I	N	S	P	G	G	S	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	M	A	I	Y	D	T	M	Q	F	I	K	P	K	V	S	T	I	C	I	G	M	A
Template Known Secondary structure		B																				S	S	S						.	.	.	.	.						B				.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S	S
Template Predicted Secondary structure																														.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.															.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	G	G	A	F	E	M	I	M	S	S	D	.	.	L	I	I	A	A	S	T	S	T	F	S	M	T	P	V	N	L	G	V	P	Y	N	L	V	G	I	H	N	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	A	G	F	H	I	V	K	E	L	I	F	T	A	S	P	I	T
Query Conservation														.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	M	G	A	F	L	L	A	A	G	E	K	G	K	R	Y	A	L	P	N	S	E	V	M	I	H	Q	P	L	G	G	A	Q	G	Q	A	T	E	I	E	I	A	A	K	R	I	L	L	L	R	D	K	L	N	K	V	L	A	E	R	T	G	Q	P	L	E	V	I	E	R	D	T	D	R	D	N	F	K	S
Template Known Secondary structure			T									S		T	T						T	T														S	S																																					T	S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	R	A	L	A	V	G	I	L	N	H	V	V	E	V	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	E	A	L	E	Y	G	L	I	D	K	I	L	T	H	L	E
Template Known Secondary structure									T	S		S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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