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Job DescriptionP52045
Confidence100.00%DateThu Jan 5 12:04:59 GMT 2012
Rank10Aligned Residues253
% Identity25%Templatec3hrxD_
PDB info PDB header:lyaseChain: D: PDB Molecule:probable enoyl-coa hydratase; PDBTitle: crystal structure of phenylacetic acid degradation protein paag
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  YVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDP
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Template Sequence  MVLKERQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLT. GAGRAFSAGQDLTEFGDRKPDYEAHLRR
Template Known Secondary structure 
TT

GGGTT
B

TT

.STT
SB

B
TTTTTTS


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   1........10.........20.........30.........40.........50. ........60.........70.........
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  LRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTA
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Template Sequence  YNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLS
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STTT
STT


GGGGT



TT

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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  SPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQ
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Template Sequence  PRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYALTKKLLLETYRLSLTEA. . LALEAVLQGQAGQTQDHE
Template Known Secondary structure 

TS
S
GGGTS
GGG

..TS
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   160.........170.........180.........190.........200.........210......... 220.........230.......
 
   245....250.........260
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Query Sequence  EGMNAFLEKRKPNFVG
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Template Sequence  EGVRAFREKRPPRFQG
Template Known Secondary structure  TTS





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   238.240.........250...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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