Job Description P52045 Confidence 100.00% Date Thu Jan 5 12:04:59 GMT 2012 Rank 46 Aligned Residues 244 % Identity 22% Template c2x58B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: the crystal structure of mfe1 liganded with coa Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	Y	Q	Y	V	N	V	V	T	I	N	K	V	A	V	I	E	F	N	Y	G	R	K	L	N	A	L	S	K	V	F	I	D	D	L	M	Q	A	L	S	D	L	N	R	P	E	I	R	C	I	I	L	R	A	P	S	G	S	K	V	F	S	A	G	H	D	I	H	E	L	P	S	G	G	R	D	P	L	S
Query Conservation
Alig confidence				.	.	.																		.																																	.																						.	.	.
Template Conservation				.	.	.																		.																																	.																						.	.	.
Template Sequence		M	A	.	.	.	E	Y	L	R	L	P	H	S	L	A	M	I	R	L	C	N	P	.	P	V	N	A	V	S	P	T	V	I	R	E	V	R	N	G	L	Q	K	A	G	S	D	H	T	V	K	A	I	V	I	C	.	G	A	N	G	N	F	C	A	G	A	D	I	H	G	F	S	A	F	T	P	G	.	.	.
Template Known Secondary structure		T		.	.	.						S	T	T									T	.	T	T	T		B																	S		T	T								.		S	T	T		S	B			B		G	G	G	G		T	T	S			.	.	.
Template Predicted Secondary structure				.	.	.																		.																																	.																						.	.	.
Template SS confidence
		1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	D	P	L	R	Q	I	T	R	M	I	Q	K	F	P	K	P	I	I	S	M	V	E	G	S	V	W	G	G	A	F	E	M	I	M	S	S	D	L	I	I	A	A	S	T	S	T	F	S	M	T	P	V	N	L	G	V	P	Y	N	L	V	G	I	H	N	L	T	R	D	A	G	F	H	I	V	K	E	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	L	A	L	G	S	L	V	D	E	I	Q	R	Y	Q	K	P	V	L	A	A	I	Q	G	V	A	L	G	G	G	L	E	L	A	L	G	C	H	Y	R	I	A	N	A	K	A	R	V	G	L	P	E	V	T	L	G	I	L	P	G	A	R	G	T	Q	L	L	P	R	V	V	G	V	P	V	A	L	D	L
Template Known Secondary structure		.	.												T		S	S								S				T									S	S						T	T						G	G	G	G	G	T				T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																																			.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	F	T	A	S	P	I	T	A	Q	R	A	L	A	V	G	I	L	N	H	V	V	E	V	E	E	L	E	D	F	T	L	Q	M	A	H	H	I	S	E	K	A	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		I	T	S	G	K	Y	L	S	A	D	E	A	L	R	L	G	I	L	D	A	V	V	K	S	D	P	V	.	E	E	A	I	K	F	A	Q	K	I	I	D	K	P	I	E	P	R	R	I	F	N	K	P	V	P	S	L	P	N	M	D	S	V	F	A	E	A	I	A	K	V	R	K	Q	Y	P	G	V	L	A	P
Template Known Secondary structure															T	T	T	S		S				S	S				.											S	S	S		S	G	G	G		G	G	G	S						T	T																S	T	T
Template Predicted Secondary structure																													.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	K	E	E	L	R	V	L	G	E	A	H	T	M	N	S	D	E	F	E	R	I	Q	G	M	R	R	A	V	Y	D	S	E	D	Y	Q	E	G	M	N	A	F	L	E	K	R	K	P	N
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		E	T	C	V	R	S	I	Q	A	S	V	K	H	P	Y	E	V	G	.	.	I	K	E	E	E	K	L	F	M	Y	L	R	A	S	G	Q	A	K	A	L	Q	Y	A	F	F	A	E	K	S	A	N
Template Known Secondary structure														S						.	.													T	S																	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions