Job Description P52045 Confidence 100.00% Date Thu Jan 5 12:04:59 GMT 2012 Rank 68 Aligned Residues 238 % Identity 21% Template c2pg8C_ PDB info PDB header:ligand binding protein Chain: C: PDB Molecule:dpgc; PDBTitle: crystal structure of r254k mutanat of dpgc with bound substrate analog Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		M	S	Y	Q	Y	V	N	V	V	T	I	N	K	V	A	V	I	E	F	N	Y	G	R	K	L	N	A	L	S	K	V	F	I	D	D	L	M	Q	A	L	S	D	L	N	R	P	E	I	R	C	I	I	L	R	A	P	S	G	S	.	.	.	.	.	.	.	.	K	V	F	S	A	G	H	D	I	H	E	L	P
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	M	E	A	V	H	L	E	R	R	D	G	V	A	R	L	T	M	C	R	D	D	R	L	N	A	E	D	G	Q	Q	V	D	D	M	E	T	A	V	D	L	A	L	L	D	P	G	V	R	V	G	L	L	R	G	G	V	M	S	H	P	R	Y	R	G	K	R	V	F	S	A	G	I	N	L	K	Y	L	S
Template Known Secondary structure					S	S	B						T	T									T	T	T	T	T		B		T	T																T	T										B			S	G	G	G	T	T		B						B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.																		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	G	R	D	P	L	S	Y	D	D	P	L	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	R	M	I	Q	K	F	P	K	P	I	I	S	M	V	E	G	S	V	W	G	G	A	F	E	M	I	M	S	S	D	L	I	I	A	A	S	T	S	T	F	S	M	T	P	V	N
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	G	G	I	S	L	V	D	F	L	M	R	K	E	L	G	Y	I	H	K	L	V	R	G	V	L	T	N	D	D	R	P	G	W	W	H	S	P	R	I	E	K	P	W	V	A	A	V	D	G	F	A	I	G	G	G	A	Q	L	L	L	V	F	D	R	V	L	A	S	S	D	A	Y	F	S	L	P	A	A	K
Template Known Secondary structure			T				T	T	T	T							T													T	T	S	T	T	T	T	T		S											S	S				T						T	T	S		S						T	T									S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	P	Y	N	L	V	G	I	H	N	L	T	R	D	A	G	F	H	I	V	K	E	L	I	F	T	A	S	P	I	T	A	Q	R	A	L	A	V	G	I	L	N	H	V	V	E	V	E	E	L	E	D	F	T	L	Q	M	A	H	H	I	S	E	K	A	P	L	A	I	A	V	I	K	E	E	L	R	V
Query Conservation
Alig confidence												.																																																					.	.	.
Template Conservation												.																																																					.	.	.
Template Sequence		E	G	I	I	P	G	A	A	N	L	.	R	L	G	R	F	A	G	P	R	V	S	R	Q	V	I	L	E	G	R	R	I	W	A	K	E	P	E	A	R	L	L	V	D	E	V	V	E	P	D	E	L	D	A	A	I	E	R	S	L	T	R	L	.	.	.	D	G	D	A	V	L	A	N	R	R	M	L	N	L
Template Known Secondary structure		S	S				T	T				.																T	S						T	T	S	G	G	G	G	G	T		S					T	T	T										G	G	G	.	.	.		S
Template Predicted Secondary structure												.																																																					.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.				.	.	.	.	.	.	390	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	E	A	H	T	M	N	S	D	E	F	E	R	I	Q	G	M	R	R	A	V	Y	D	S	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	E	S	P	D	G	F	R	A	Y	M	A	E	F	A	L	M	Q	A	L	R	L	Y	G	H	D
Template Known Secondary structure				S																					T		T	T
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions