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Job DescriptionP52045
Confidence99.20%DateThu Jan 5 12:04:59 GMT 2012
Rank78Aligned Residues152
% Identity22%Templatec2deoA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:441aa long hypothetical nfed protein; PDBTitle: 1510-n membrane protease specific for a stomatin homolog from2 pyrococcus horikoshii
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  INKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITR
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Template Sequence  KNIVYVAQIK. . . . . GQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRADA. . . . . . . . . . . . . . . . . . . . XXNIVQ
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   21........30 .........40.........50.........60......... 70.....
 
   91........100... ......110.........120.........130.........140.........150... ......160.....
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Query Sequence  MIQKFPKPIISMV. . . EGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAG. . FHIVKELIFTAS
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Template Sequence  RIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAXAPGTSIGAC. . . . RTNYFIAYIKSLAQESGRNATIAEEFITKDL
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   76...80.........90.........100.........110.........120 .........130.........140.........150.
 
   166...170.........180.... .....190.
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Query Sequence  PITAQRALAVGILNHVVEV. EELEDFT
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Template Sequence  SLTPEEALKYGVIEVVARDINELLKKS
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   170.........180.........190......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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