Job Description P52045 Confidence 98.53% Date Thu Jan 5 12:04:59 GMT 2012 Rank 97 Aligned Residues 151 % Identity 17% Template c1x0uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii Resolution 2.20 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	V	I	E	F	N	Y	G	R	K	L	N	A	L	S	K	V	F	I	D	D	L	M	Q	A	L	S	D	L	N	R	P	E	I	R	C	I	I	L	R	A	P	S	G	S	K	V	F	S	A	G	H	D	I	H	E	L	P	S	G	G	R	D	P	L	S	Y	D	D	P	L	R	Q	I	T	R	M	I	Q
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	A	Y	A	Q	D	F	T	V	L	G	G	S	L	G	E	T	H	A	N	K	I	V	R	A	Y	E	L	A	L	K	V	G	A	P	V	V	G	I	N	D	S	G	G	A	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	G	A	L	S	L	E	G	Y	G	A	V	F	K	M	N	V
Template Known Secondary structure									T	T	T	G	G	G		B																			T											S	B		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.															.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		94	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																															.	.
Query SS confidence					.	.																															.	.
Query Sequence		K	F	P	.	.	K	P	I	I	S	M	V	E	G	S	V	W	G	G	A	F	E	M	I	M	S	S	D	L	I	I	A	A	S	T	.	.	S	T	F	S	M	T	P	V	N	L	G	V	P	Y	N	L	V	G	I	H	N	L	T	R	D	A	G	F	H	I	V	K	E	L	I	F	T	A	S	P	I	T	A
Query Conservation					.	.																															.	.
Alig confidence					.	.																															.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		M	A	S	G	V	I	P	Q	I	T	I	M	A	G	P	A	A	G	G	A	V	Y	S	P	A	L	T	D	F	I	I	M	I	K	G	D	A	Y	Y	M	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	G	P	E	I	T	K	.	.	V	V	L	G	E	E	V	S	F
Template Known Secondary structure				T	T	T	S								S				G	G	G	G						S	S							S	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S					.	.			S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																					.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.
		170	.								.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.
Query Sequence		Q	R	.	.	.	.	.	.	.	A	L	A	V	G	I	L	N	H	V	V	E	V	E	E	L	E	D	F	T	L	Q	M	A	H	H	I	S	E	K	A	P
Query Conservation				.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.															.	.	.
Template Conservation																									.	.	.
Template Sequence		Q	D	L	G	G	A	V	V	H	A	T	K	S	G	V	V	H	F	M	V	D	S	E	.	.	.	Q	E	A	I	N	L	T	K	R	L	L	S	Y	L	P
Template Known Secondary structure						B							T	T				S				S	S		.	.	.														S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions